RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YDJ1P25491 409 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W CPR3P25719 182 aa5.33□□□□□ -1.56
SPG4YMR107W BIO2P32451 375 aa5.33□□□□□ -1.56
SPG4YMR107W HIR2P32480 875 aa5.33□□□□□ -1.56
SPG4YMR107W SRB2P34162 210 aa5.33□□□□□ -1.56
SPG4YMR107W RRN3P36070 627 aa5.33□□□□□ -1.56
SPG4YMR107W ECM13P38195 257 aa5.33□□□□□ -1.56
SPG4YMR107W ECM8P38246 354 aa5.33□□□□□ -1.56
SPG4YMR107W ATG12P38316 186 aa5.33□□□□□ -1.56
SPG4YMR107W PHO89P38361 574 aa5.33□□□□□ -1.56
SPG4YMR107W FHL1P39521 936 aa5.33□□□□□ -1.56
SPG4YMR107W YAT2P40017 923 aa5.33□□□□□ -1.56
SPG4YMR107W SER3P40054 469 aa5.33□□□□□ -1.56
SPG4YMR107W FAR3P46671 204 aa5.33□□□□□ -1.56
SPG4YMR107W RTT101P47050 842 aa5.33□□□□□ -1.56
SPG4YMR107W ASN2P49090 572 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W DIE2P50076 525 aa5.33□□□□□ -1.56
SPG4YMR107W MON1P53129 644 aa5.33□□□□□ -1.56
SPG4YMR107W CNM67P53865 581 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W YNL108CP53929 270 aa5.33□□□□□ -1.56
SPG4YMR107W APP1P53933 587 aa5.33□□□□□ -1.56
SPG4YMR107W VAC7P53950 1165 aa5.33□□□□□ -1.56
SPG4YMR107W FOX2Q02207 900 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W MUK1Q02866 612 aa5.33□□□□□ -1.56
SPG4YMR107W RSC9Q03124 581 aa5.33□□□□□ -1.56
SPG4YMR107W DYN3Q04949 312 aa5.33□□□□□ -1.56
SPG4YMR107W MRX10Q05648 414 aa5.33□□□□□ -1.56
SPG4YMR107W SSQ1Q05931 657 aaPredicted RBP5.33□□□□□ -1.56
SPG4YMR107W THI7Q05998 598 aa5.33□□□□□ -1.56
SPG4YMR107W YPS7Q06325 596 aa5.33□□□□□ -1.56
SPG4YMR107W IRC3Q06683 689 aa5.33□□□□□ -1.56
SPG4YMR107W VPS36Q06696 566 aa5.33□□□□□ -1.56
SPG4YMR107W YOL159CQ08300 171 aa5.33□□□□□ -1.56
SPG4YMR107W SAM4Q08985 325 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W YMR030W-AQ3E760 96 aa5.33□□□□□ -1.56
SPG4YMR107W FKS1P38631 1876 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W ILV1P00927 576 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W PHO8P11491 566 aa5.32□□□□□ -1.56
SPG4YMR107W INO1P11986 533 aa5.32□□□□□ -1.56
SPG4YMR107W CHS2P14180 963 aa5.32□□□□□ -1.56
SPG4YMR107W SEC15P22224 910 aa5.32□□□□□ -1.56
SPG4YMR107W YSP3P25036 478 aa5.32□□□□□ -1.56
SPG4YMR107W ZIP1P31111 875 aa5.32□□□□□ -1.56
SPG4YMR107W GUT2P32191 649 aa5.32□□□□□ -1.56
SPG4YMR107W AEP1P32493 518 aa5.32□□□□□ -1.56
SPG4YMR107W BCS1P32839 456 aa5.32□□□□□ -1.56
SPG4YMR107W CYM1P32898 989 aa5.32□□□□□ -1.56
SPG4YMR107W SDH8P38345 138 aa5.32□□□□□ -1.56
SPG4YMR107W SUL1P38359 859 aa5.32□□□□□ -1.56
SPG4YMR107W YHK8P38776 514 aa5.32□□□□□ -1.56
SPG4YMR107W EGD2P38879 174 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W SEC31P38968 1273 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W SOP4P39543 234 aaPredicted RBP5.32□□□□□ -1.56
SPG4YMR107W FLC2P39719 783 aa5.32□□□□□ -1.56
SPG4YMR107W PAC11P40960 533 aa5.32□□□□□ -1.56
SPG4YMR107W ELP2P42935 788 aa5.32□□□□□ -1.56
SPG4YMR107W GUS1P46655 708 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SPG4YMR107W ARC1P46672 376 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W MNN11P46985 422 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W ALB1P47019 175 aaPredicted RBP5.32□□□□□ -1.56
SPG4YMR107W YJR115WP47152 169 aa5.32□□□□□ -1.56
SPG4YMR107W COS5P47187 383 aa5.32□□□□□ -1.56
SPG4YMR107W GNP1P48813 663 aa5.32□□□□□ -1.56
SPG4YMR107W YML6P51998 286 aa5.32□□□□□ -1.56
SPG4YMR107W BUD32P53323 261 aa5.32□□□□□ -1.56
SPG4YMR107W RPA49Q01080 415 aaPredicted RBP5.32□□□□□ -1.56
SPG4YMR107W ECM9Q02202 377 aa5.32□□□□□ -1.56
SPG4YMR107W ROD1Q02805 837 aa5.32□□□□□ -1.56
SPG4YMR107W TAF12Q03761 539 aa5.32□□□□□ -1.56
SPG4YMR107W RQC1Q05468 723 aaKnown RBP5.32□□□□□ -1.56
SPG4YMR107W HSP42Q12329 375 aa5.32□□□□□ -1.56
SPG4YMR107W DCP1Q12517 231 aaPredicted RBP5.32□□□□□ -1.56
SPG4YMR107W COX4P04037 155 aa5.31□□□□□ -1.56
SPG4YMR107W PHR1P05066 565 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SPG4YMR107W LEU1P07264 779 aaKnown RBP5.31□□□□□ -1.56
SPG4YMR107W PET494P07390 489 aaPredicted RBP5.31□□□□□ -1.56
SPG4YMR107W SEN2P16658 377 aa5.31□□□□□ -1.56
SPG4YMR107W VPS3P23643 1011 aa5.31□□□□□ -1.56
SPG4YMR107W THI4P32318 326 aa5.31□□□□□ -1.56
SPG4YMR107W SPT14P32363 452 aa5.31□□□□□ -1.56
SPG4YMR107W STE5P32917 917 aa5.31□□□□□ -1.56
SPG4YMR107W YJL070CP40361 888 aa5.31□□□□□ -1.56
SPG4YMR107W DOT5P40553 215 aa5.31□□□□□ -1.56
SPG4YMR107W GUF1P46943 645 aa5.31□□□□□ -1.56
SPG4YMR107W YJL181WP46987 611 aa5.31□□□□□ -1.56
SPG4YMR107W SNX4P47057 423 aa5.31□□□□□ -1.56
SPG4YMR107W HOC1P47124 396 aa5.31□□□□□ -1.56
SPG4YMR107W PIP2P52960 996 aa5.31□□□□□ -1.56
SPG4YMR107W TAM41P53230 385 aa5.31□□□□□ -1.56
SPG4YMR107W YNL033WP53964 284 aa5.31□□□□□ -1.56
SPG4YMR107W YNL019CP53975 284 aa5.31□□□□□ -1.56
SPG4YMR107W IVY1Q04934 453 aa5.31□□□□□ -1.56
SPG4YMR107W YPR172WQ06608 200 aa5.31□□□□□ -1.56
SPG4YMR107W ECM30Q06673 1274 aa5.31□□□□□ -1.56
SPG4YMR107W YLR031WQ07978 186 aa5.31□□□□□ -1.56
SPG4YMR107W RAX1Q08760 435 aa5.31□□□□□ -1.56
SPG4YMR107W WRS1Q12109 432 aaKnown RBP5.31□□□□□ -1.56
SPG4YMR107W TY3A-GQ12173 290 aa5.31□□□□□ -1.56
SPG4YMR107W KCS1Q12494 1050 aa5.31□□□□□ -1.56
SPG4YMR107W BRR1Q99177 341 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 162.8 ms