RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 TESPA1A2RU30 521 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-208ENST00000640135 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 CCDC84Q86UT8 332 aaPredicted RBP12.3□□□□□ -0.44
SCN1B-208ENST00000640135 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 SLC17A8Q8NDX2 589 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCN1B-208ENST00000640135 ADPGKQ9BRR6 497 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 OSBPL3Q9H4L5 887 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 PLCB3Q01970 1234 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 ARID5AQ03989 594 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 PAK1Q13153 545 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 VPS72Q15906 364 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 JAKMIP2Q96AA8 810 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 TEKT3Q9BXF9 490 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
SCN1B-208ENST00000640135 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 H7C1W4 665 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 EXOC3O60645 756 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 NAP1L3Q99457 506 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 DBNLQ9UJU6 430 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 CPSF1Q10570 1443 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 DDX39AO00148 427 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 PFKFB2O60825 505 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 FERP16591 822 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 TNFAIP3P21580 790 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 DPP9Q86TI2 863 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 VPS54Q9P1Q0 977 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 PUS3Q9BZE2 481 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 SEC31BQ9NQW1 1179 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
SCN1B-208ENST00000640135 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
SCN1B-208ENST00000640135 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 CTAGE9A4FU28 777 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 GAS8O95995 478 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 KRT5P13647 590 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 CEP128Q6ZU80 1094 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 MAK16Q9BXY0 300 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 BCRP11274 1271 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 ATP2A2P16615 1042 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 CCDC186Q7Z3E2 898 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 RSPH3Q86UC2 560 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 UNC13BO14795 1591 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 PTGS1P23219 599 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 ABCD1P33897 745 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 TRAPPC10P48553 1259 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 TTLL11Q8NHH1 800 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 MRPL44Q9H9J2 332 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 SRP68Q9UHB9 627 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 LAD1O00515 517 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 ZEB2O60315 1214 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 ADD2P35612 726 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 HSP90AA4PQ58FG1 418 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 GSTA5Q7RTV2 222 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 GABPB2Q8TAK5 448 aaPredicted RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
SCN1B-208ENST00000640135 CDHR2Q9BYE9 1310 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
SCN1B-208ENST00000640135 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.44
SCN1B-208ENST00000640135 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 CCDC50Q8IVM0 306 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 TPH2Q8IWU9 490 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 ALKQ9UM73 1620 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 CLRN2A0PK11 232 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.44
SCN1B-208ENST00000640135 AKR1B15C9JRZ8 316 aaPredicted RBP12.27□□□□□ -0.45
SCN1B-208ENST00000640135 PLA2G4DQ86XP0 818 aa12.27□□□□□ -0.45
SCN1B-208ENST00000640135 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.45
SCN1B-208ENST00000640135 RNF26Q9BY78 433 aaPredicted RBP12.27□□□□□ -0.45
SCN1B-208ENST00000640135 CLSTN2Q9H4D0 955 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms