RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
SCARB2-220ENST00000640076 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 FOXP2O15409 715 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 CXCL9Q07325 125 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 BMS1Q14692 1282 aaKnown RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 FAM43BQ6ZT52 329 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 LCORLQ8N3X6 602 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 FAM163AQ96GL9 167 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 ARMT1Q9H993 441 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 TTF2Q9UNY4 1162 aaKnown RBP9.45□□□□□ -0.9
SCARB2-220ENST00000640076 KIAA1024Q9UPX6 916 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 MROH7-TTC4A0A0A0MT08 1334 aa9.45□□□□□ -0.9
SCARB2-220ENST00000640076 F8W031 263 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 PSMD14O00487 310 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 LDHCP07864 332 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 LMNB1P20700 586 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 RNF19AQ9NV58 838 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 VTI1BQ9UEU0 232 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 GAKO14976 1311 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 MYO3BQ8WXR4 1341 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 FZD9O00144 591 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 HSPA4P34932 840 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 DYNLL1P63167 89 aaKnown RBP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 TRAF7Q6Q0C0 670 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 PCDH12Q9NPG4 1184 aa9.44□□□□□ -0.9
SCARB2-220ENST00000640076 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
SCARB2-220ENST00000640076 ADAMTSL1Q8N6G6 1762 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 GPR75-ASB3A0A0A6YYF3 556 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 GNAT2P19087 354 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 SCNN1DP51172 638 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 PPP4CP60510 307 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 NECTIN1Q15223 517 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 GPR162Q16538 588 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 IER5LQ5T953 404 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 CIAPIN1Q6FI81 312 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 MKNK1Q9BUB5 465 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 MRIQ9BWK5 157 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 GSG1L2A8MUP6 293 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 PRKAB2O43741 272 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 BAG3O95817 575 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 BTDP43251 543 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 DSC3Q14574 896 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 TNIP1Q15025 636 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 HHIPL2Q6UWX4 724 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 AGBL3Q8NEM8 1001 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 TEKT1Q969V4 418 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 KIF2CQ99661 725 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 EPB41L4AQ9HCS5 686 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-220ENST00000640076 PALD1Q9ULE6 856 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
SCARB2-220ENST00000640076 FGAP02671 866 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 NPR3P17342 541 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 CRKP46108 304 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
SCARB2-220ENST00000640076 PSMD2Q13200 908 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 ALX1Q15699 326 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 PLEKHG6Q3KR16 790 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-220ENST00000640076 ZDHHC15Q96MV8 337 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 NOL10Q9BSC4 688 aaKnown RBP9.42□□□□□ -0.9
SCARB2-220ENST00000640076 IRF2BPLQ9H1B7 796 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 ZNF541Q9H0D2 1346 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 CDK5RAP2Q96SN8 1893 aa9.42□□□□□ -0.9
SCARB2-220ENST00000640076 RPAP1Q9BWH6 1393 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-220ENST00000640076 SLC27A2O14975 620 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 STK10O94804 968 aaKnown RBP9.41□□□□□ -0.9
SCARB2-220ENST00000640076 APPP05067 770 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 SLC10A3P09131 477 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 RHBDL3P58872 404 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 APOBEC3HQ6NTF7 200 aaKnown RBP9.41□□□□□ -0.9
SCARB2-220ENST00000640076 FILIP1Q7Z7B0 1213 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 IFNL3Q8IZI9 196 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 SDR42E1Q8WUS8 393 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 SGSM3Q96HU1 749 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 CRNKL1Q9BZJ0 848 aaKnown RBP9.41□□□□□ -0.9
SCARB2-220ENST00000640076 CTNNA3Q9UI47 895 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 BAZ2AQ9UIF9 1905 aaKnown RBP9.41□□□□□ -0.9
SCARB2-220ENST00000640076 TIAM2Q8IVF5 1701 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms