RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 TRIM47Q96LD4 638 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 CNNM2Q9H8M5 875 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 FHOD1Q9Y613 1164 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 RNF225M0QZC1 329 aaPredicted RBP8.72□□□□□ -1.01
NECAP1-221ENST00000639955 N4BP1O75113 896 aaKnown RBP8.72□□□□□ -1.01
NECAP1-221ENST00000639955 TADA3O75528 432 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 STAT6P42226 847 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 CHMP4BP1P59074 171 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 RAD51AP2Q09MP3 1159 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 SMC1AQ14683 1233 aaKnown RBP8.72□□□□□ -1.01
NECAP1-221ENST00000639955 INF2Q27J81 1249 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 ANKRD13CQ8N6S4 541 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 PAGE5Q96GU1 130 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 CHP1Q99653 195 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 SRP68Q9UHB9 627 aaKnown RBP8.72□□□□□ -1.01
NECAP1-221ENST00000639955 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 OVOS2A0A0G2JMS6 1433 aa8.72□□□□□ -1.01
NECAP1-221ENST00000639955 CHD2O14647 1828 aaKnown RBP8.72□□□□□ -1.01
NECAP1-221ENST00000639955 USP17L3A6NCW0 530 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 USP17L4A6NCW7 530 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 CYP27A1Q02318 531 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 CAVIN4Q5BKX8 364 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 DZIP1Q86YF9 867 aaKnown RBP8.71□□□□□ -1.01
NECAP1-221ENST00000639955 ANKRD18AQ8IVF6 992 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 VGLL2Q8N8G2 317 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 ZSCAN10Q96SZ4 725 aaPredicted RBP8.71□□□□□ -1.01
NECAP1-221ENST00000639955 ZHX3Q9H4I2 956 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 MKNK2Q9HBH9 465 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.01
NECAP1-221ENST00000639955 CCP110O43303 1012 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 IDEP14735 1019 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 RNASE9P60153 205 aaKnown RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 FAM43BQ6ZT52 329 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 KIAA1328Q86T90 577 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 NELFBQ8WX92 580 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 RNF41Q9H4P4 317 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 ACTN4O43707 911 aaKnown RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 KLK7P49862 253 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 PLCD1P51178 756 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 GTF2A1P52655 376 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 HNRNPH2P55795 449 aaKnown RBP8.71□□□□□ -1.02
NECAP1-221ENST00000639955 LETM2Q2VYF4 491 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 MLKLQ8NB16 471 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 GOLGA1Q92805 767 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 KANSL2Q9H9L4 492 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 ANKIB1Q9P2G1 1089 aa8.71□□□□□ -1.02
NECAP1-221ENST00000639955 ARID5AQ03989 594 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 CLEC10AQ8IUN9 316 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 MAPKAPK5Q8IW41 473 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 GJA10Q969M2 543 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 GNL3LQ9NVN8 582 aaKnown RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 N4BP2Q86UW6 1770 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SCN11AQ9UI33 1791 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 MARCH6O60337 910 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 UBA7P41226 1012 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 LIFRP42702 1097 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TFAP4Q01664 338 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 GABPB1Q06547 395 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 KRT31Q15323 416 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 DDB1Q16531 1140 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 DYMQ7RTS9 669 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SGMS1Q86VZ5 419 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SRBD1Q8N5C6 995 aaKnown RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 L2HGDHQ9H9P8 463 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SLIT3O75094 1523 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 MROH5Q6ZUA9 1318 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TRIM21P19474 475 aaKnown RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 ITPK1Q13572 414 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TTC19Q6DKK2 380 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SMCR8Q8TEV9 937 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-221ENST00000639955 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 SMARCAL1Q9NZC9 954 aa8.7□□□□□ -1.02
NECAP1-221ENST00000639955 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 H2AFXP16104 143 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-221ENST00000639955 SIK1P57059 783 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 MORC3Q14149 939 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 LONRF2Q1L5Z9 754 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 CC2D1AQ6P1N0 951 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-221ENST00000639955 TRMT1LQ7Z2T5 733 aaKnown RBP8.69□□□□□ -1.02
NECAP1-221ENST00000639955 TMEM139Q8IV31 216 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 NOA1Q8NC60 698 aaKnown RBP8.69□□□□□ -1.02
NECAP1-221ENST00000639955 PNKPQ96T60 521 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 BPIFA3Q9BQP9 254 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 SRRTQ9BXP5 876 aaKnown RBP8.69□□□□□ -1.02
NECAP1-221ENST00000639955 KAT14Q9H8E8 782 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 JADE2Q9NQC1 790 aa8.69□□□□□ -1.02
NECAP1-221ENST00000639955 TBC1D7Q9P0N9 293 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms