RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 LIFRP42702 1097 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 EXOSC10Q01780 885 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 CABP7Q86V35 215 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 C10orf67Q8IYJ2 551 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 ERMNQ8TAM6 284 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 CCNL1Q9UK58 526 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 EFCAB8A8MWE9 144 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 KIF28PB7ZC32 967 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 PPARDQ03181 441 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 RAPGEF1Q13905 1077 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 OR8K1Q8NGG5 319 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 ALDH8A1Q9H2A2 487 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 RABEP2Q9H5N1 569 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 NEDD4P46934 1319 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 SOS2Q07890 1332 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 TMEM232C9JQI7 657 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 FBXO38Q6PIJ6 1188 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 WDR66Q8TBY9 1149 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 SNX29Q8TEQ0 813 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 PLEKHA4Q9H4M7 779 aa9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 BIN2Q9UBW5 565 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-222ENST00000639880 TMEM131LA2VDJ0 1609 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 SHPRHQ149N8 1683 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 SMCO2A6NFE2 343 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 ZEB2O60315 1214 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 TECP42680 631 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 TUBB4BP68371 445 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 SUSD4Q5VX71 490 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 CNNM4Q6P4Q7 775 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 FAM170AA1A519 330 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 NEFHP12036 1026 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 RBL2Q08999 1139 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 IQCB1Q15051 598 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 DCAF17Q5H9S7 520 aaPredicted RBP9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 VSTM4Q8IW00 320 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 DHX40Q8IX18 779 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 NLRC4Q9NPP4 1024 aa9.4□□□□□ -0.9
HNRNPU-222ENST00000639880 SOWAHDA6NJG2 315 aa9.4□□□□□ -0.91
HNRNPU-222ENST00000639880 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.91
HNRNPU-222ENST00000639880 DYDC1Q8WWB3 177 aa9.4□□□□□ -0.91
HNRNPU-222ENST00000639880 ARPP21Q9UBL0 812 aaPredicted RBP9.4□□□□□ -0.91
HNRNPU-222ENST00000639880 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 FOXN1O15353 648 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 RPN1P04843 607 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 TUBBP07437 444 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 MAGEA1P43355 309 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 RFX5P48382 616 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 VAV2P52735 878 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 TNIP1Q15025 636 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 GSDMAQ96QA5 445 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ENC1O14682 589 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 CTDNEP1O95476 244 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 MRPL12P52815 198 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 CETN1Q12798 172 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ATRIPQ8WXE1 791 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 IVLP07476 585 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ERCC5P28715 1186 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 PLS1Q14651 629 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 EYA3Q99504 573 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ATP2C2O75185 946 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 CALCRLQ16602 461 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SHC4Q6S5L8 630 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 RRAGAQ7L523 313 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 NBPF11Q86T75 865 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 ISCA1Q9BUE6 129 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 SAR1BQ9Y6B6 198 aa9.39□□□□□ -0.91
HNRNPU-222ENST00000639880 AP5Z1O43299 807 aa9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 COPB1P53618 953 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 RESP18Q5W5W9 173 aa9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 SLC35F6Q8N357 371 aa9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 ANKRD13CQ8N6S4 541 aa9.38□□□□□ -0.91
HNRNPU-222ENST00000639880 EPN1Q9Y6I3 576 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms