RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 PDE3AQ14432 1141 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 SKIV2LQ15477 1246 aaKnown RBP6.72□□□□□ -1.33
PDE4D-229ENST00000638939 LRIT3Q3SXY7 679 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 TTC39AQ5SRH9 613 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 ADGRA1Q86SQ6 560 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 FOXP4Q8IVH2 680 aaPredicted RBP6.72□□□□□ -1.33
PDE4D-229ENST00000638939 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 CRACR2BQ8N4Y2 399 aaPredicted RBP6.72□□□□□ -1.33
PDE4D-229ENST00000638939 GPRC5AQ8NFJ5 357 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 USP6NLQ92738 828 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
PDE4D-229ENST00000638939 LRCH3Q96II8 777 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 C12orf42Q96LP6 360 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 TRIM34Q9BYJ4 488 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 EHD4Q9H223 541 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 C11orf49Q9H6J7 331 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 TXNRD2Q9NNW7 524 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 CCER2I3L3R5 266 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 HAX1O00165 279 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 MAP3K7O43318 606 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 CYP2E1P05181 493 aaPredicted RBP6.71□□□□□ -1.34
PDE4D-229ENST00000638939 RGS2P41220 211 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 JAG1P78504 1218 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 PDE4CQ08493 712 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 TRIM32Q13049 653 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 SHROOM1Q2M3G4 852 aaPredicted RBP6.71□□□□□ -1.34
PDE4D-229ENST00000638939 CCDC158Q5M9N0 1113 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 MORN1Q5T089 497 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 LBX2Q6XYB7 198 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 GPR142Q7Z601 462 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 MAPKAPK5Q8IW41 473 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 TDHQ8IZJ6 230 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 TGFBRAP1Q8WUH2 860 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 DBNDD2Q9BQY9 259 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 PORCNQ9H237 461 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 STAP2Q9UGK3 403 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 DBNLQ9UJU6 430 aaKnown RBP6.71□□□□□ -1.34
PDE4D-229ENST00000638939 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
PDE4D-229ENST00000638939 ATMINO43313 823 aaPredicted RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 MSCO60682 206 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 GDF11O95390 407 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 CYP2B6P20813 491 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 MAGEA10P43363 369 aaPredicted RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 USP14P54578 494 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 CCNA1P78396 465 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 LHX8Q68G74 356 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 TATDN1Q6P1N9 297 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 POTEEQ6S8J3 1075 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 PLEKHH3Q7Z736 793 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 P2RX7Q99572 595 aaKnown RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 KIAA1683Q9H0B3 1180 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 PIH1D3Q9NQM4 214 aaKnown RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 SNRKQ9NRH2 765 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 RBPJLQ9UBG7 517 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 SERPINB13Q9UIV8 391 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 ZMYND8Q9ULU4 1186 aaPredicted RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 TNNQ9UQP3 1299 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 NOP58Q9Y2X3 529 aaKnown RBP6.7□□□□□ -1.34
PDE4D-229ENST00000638939 RABGAP1Q9Y3P9 1069 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 REV3LO60673 3130 aa6.7□□□□□ -1.34
PDE4D-229ENST00000638939 ROBO3Q96MS0 1386 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 TTC28Q96AY4 2481 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 TRANK1O15050 2925 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L15C9J2P7 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L13C9JLJ4 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L11C9JVI0 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L18D6R9N7 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L22D6RA61 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L17D6RBQ6 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L19D6RCP7 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L20D6RJB6 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 BCAR3O75815 825 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CNMDO75829 334 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 GLRX3O76003 335 aaKnown RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 GH2P01242 217 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 HOXC6P09630 235 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 VCAM1P19320 739 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CYP7A1P22680 504 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CCND3P30281 292 aaPredicted RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 ZAP70P43403 619 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 USP17L24Q0WX57 530 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 OS9Q13438 667 aaPredicted RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 GRB14Q14449 540 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CCL14Q16627 93 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 ZKSCAN2Q63HK3 967 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 CCAR1Q8IX12 1150 aaKnown RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 DEFB123Q8N688 67 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 SLC17A8Q8NDX2 589 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 PTCD2Q8WV60 388 aaKnown RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 FRAT1Q92837 279 aaPredicted RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 FEZ1Q99689 392 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 TLR7Q9NYK1 1049 aaKnown RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 SAP30BPQ9UHR5 308 aaKnown RBP6.69□□□□□ -1.34
PDE4D-229ENST00000638939 STXBP5LQ9Y2K9 1186 aa6.69□□□□□ -1.34
PDE4D-229ENST00000638939 LCTP09848 1927 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms