RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 RTN1Q16799 776 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 DPF2Q92785 391 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 GMLQ99445 158 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 ZKSCAN3Q9BRR0 538 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
PRAMEF13-202ENST00000638454 DDX60LQ5H9U9 1706 aaKnown RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 CDK5RAP2Q96SN8 1893 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 ECM29Q5VYK3 1845 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 NID2Q14112 1375 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 FZD9O00144 591 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 BRD1O95696 1058 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 SYT1P21579 422 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 PLCD1P51178 756 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 RASSF7Q02833 373 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 ENAHQ8N8S7 591 aaPredicted RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 NSUN7Q8NE18 718 aaKnown RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
PRAMEF13-202ENST00000638454 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 H7C1D1 291 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 XBP1P17861 261 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 GNAQP50148 359 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 TRIM29Q14134 588 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 SEC23AQ15436 765 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 NEDD1Q8NHV4 660 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 GJA3Q9Y6H8 435 aa12.34□□□□□ -0.43
PRAMEF13-202ENST00000638454 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ATRNL1Q5VV63 1379 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 RASA1P20936 1047 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 TCP10Q12799 353 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 HOOK2Q96ED9 719 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 PRMT6Q96LA8 375 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 VEZTQ9HBM0 779 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 DDX4Q9NQI0 724 aaKnown RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
PRAMEF13-202ENST00000638454 PLIN4Q96Q06 1357 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 COL4A5P29400 1685 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 F13A1P00488 732 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 IFNAR1P17181 557 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 MCM4P33991 863 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 GABPAQ06546 454 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 NFIAQ12857 509 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 TMCO4Q5TGY1 634 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 GPC2Q8N158 579 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 CSRNP1Q96S65 589 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
PRAMEF13-202ENST00000638454 MPHOSPH10O00566 681 aaKnown RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 JAK2O60674 1132 aa12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 SLC44A5Q8NCS7 719 aa12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF13-202ENST00000638454 MYH8P13535 1937 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms