RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HOXC6P09630 235 aa22.25■■□□□ 1.15
CLN6-220ENST00000637450 AKR1B1P15121 316 aa22.25■■□□□ 1.15
CLN6-220ENST00000637450 KIAA1755Q5JYT7 1200 aa22.25■■□□□ 1.15
CLN6-220ENST00000637450 ZSCAN25Q6NSZ9 544 aa22.25■■□□□ 1.15
CLN6-220ENST00000637450 FLRT1Q9NZU1 646 aa22.25■■□□□ 1.15
CLN6-220ENST00000637450 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 USP17L21D6R901 530 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 SMIM22K7EJ46 135 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 CDK8P49336 464 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 GRB14Q14449 540 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 CCDC17Q96LX7 622 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 STAP2Q9UGK3 403 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 IVNS1ABPQ9Y6Y0 642 aa22.24■■□□□ 1.15
CLN6-220ENST00000637450 A0A1W2PPC1 479 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 MFSD14CQ5VZR4 134 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 C7orf61Q8IZ16 206 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 LPAR1Q92633 364 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 PUS7LQ9H0K6 701 aaKnown RBP22.23■■□□□ 1.15
CLN6-220ENST00000637450 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 TMX2Q9Y320 296 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 SLC4A4Q9Y6R1 1079 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 NAV1Q8NEY1 1877 aa22.23■■□□□ 1.15
CLN6-220ENST00000637450 DSG3P32926 999 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 ATP2B2Q01814 1243 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 ICA1Q05084 483 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 CTR9Q6PD62 1173 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 C16orf86Q6ZW13 317 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 CLEC10AQ8IUN9 316 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 AMOTL1Q8IY63 956 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 NPLOC4Q8TAT6 608 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 DDRGK1Q96HY6 314 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 MOV10L1Q9BXT6 1211 aaKnown RBP22.22■■□□□ 1.15
CLN6-220ENST00000637450 DCTPP1Q9H773 170 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 ECHDC1Q9NTX5 307 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 PFASO15067 1338 aa22.22■■□□□ 1.15
CLN6-220ENST00000637450 STRNO43815 780 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 IGHA2P01877 340 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 COL6A1P12109 1028 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 MB21D1Q8N884 522 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 SPATC1LQ9H0A9 340 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 VCPKMTQ9H867 229 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 LAMA3Q16787 3333 aa22.21■■□□□ 1.15
CLN6-220ENST00000637450 SPICE1Q8N0Z3 855 aa22.2■■□□□ 1.14
CLN6-220ENST00000637450 SHCBP1Q8NEM2 672 aa22.2■■□□□ 1.14
CLN6-220ENST00000637450 GDF15Q99988 308 aa22.2■■□□□ 1.14
CLN6-220ENST00000637450 ZMYND8Q9ULU4 1186 aaPredicted RBP22.2■■□□□ 1.14
CLN6-220ENST00000637450 FLOT1O75955 427 aa22.19■■□□□ 1.14
CLN6-220ENST00000637450 ERCC3P19447 782 aa22.19■■□□□ 1.14
CLN6-220ENST00000637450 STRBPQ96SI9 672 aaKnown RBP22.19■■□□□ 1.14
CLN6-220ENST00000637450 KANSL2Q9H9L4 492 aa22.19■■□□□ 1.14
CLN6-220ENST00000637450 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
CLN6-220ENST00000637450 ADORA2AP29274 412 aa22.18■■□□□ 1.14
CLN6-220ENST00000637450 CYP2C19P33261 490 aa22.18■■□□□ 1.14
CLN6-220ENST00000637450 BMP8BP34820 402 aa22.18■■□□□ 1.14
CLN6-220ENST00000637450 DPP9Q86TI2 863 aa22.18■■□□□ 1.14
CLN6-220ENST00000637450 WDR46O15213 610 aaKnown RBP22.17■■□□□ 1.14
CLN6-220ENST00000637450 OLFML2BQ68BL8 750 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 KBTBD3Q8NAB2 608 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 TRPV1Q8NER1 839 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 ATG4CQ96DT6 458 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 MROH8Q9H579 483 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
CLN6-220ENST00000637450 DDX20Q9UHI6 824 aaKnown RBP22.17■■□□□ 1.14
CLN6-220ENST00000637450 ALPK3Q96L96 1907 aa22.17■■□□□ 1.14
CLN6-220ENST00000637450 GSG1L2A8MUP6 293 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 MSCO60682 206 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 SYN1P17600 705 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 PLS1Q14651 629 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 SBK1Q52WX2 424 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 OSBP2Q969R2 916 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 ADAMTS5Q9UNA0 930 aa22.16■■□□□ 1.14
CLN6-220ENST00000637450 COBLO75128 1261 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 CNGA1P29973 690 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 LRRC26Q2I0M4 334 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 GIMAP6Q6P9H5 292 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 ABRAQ8N0Z2 381 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 GPATCH3Q96I76 525 aa22.15■■□□□ 1.14
CLN6-220ENST00000637450 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.15■■□□□ 1.14
CLN6-220ENST00000637450 SOX1O00570 391 aaPredicted RBP22.14■■□□□ 1.13
CLN6-220ENST00000637450 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
CLN6-220ENST00000637450 CYBAP13498 195 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 TMEM132BQ14DG7 1078 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 TSHZ3Q63HK5 1081 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 NCAPG2Q86XI2 1143 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 RLFQ13129 1914 aa22.14■■□□□ 1.13
CLN6-220ENST00000637450 MAGEA10P43363 369 aaPredicted RBP22.13■■□□□ 1.13
CLN6-220ENST00000637450 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
CLN6-220ENST00000637450 APPBP2Q92624 585 aa22.13■■□□□ 1.13
CLN6-220ENST00000637450 GOPCQ9HD26 462 aa22.13■■□□□ 1.13
CLN6-220ENST00000637450 BAZ2AQ9UIF9 1905 aaKnown RBP22.13■■□□□ 1.13
CLN6-220ENST00000637450 SLC25A27O95847 323 aa22.12■■□□□ 1.13
CLN6-220ENST00000637450 ZFYP08048 801 aaPredicted RBP22.12■■□□□ 1.13
CLN6-220ENST00000637450 RASA1P20936 1047 aa22.12■■□□□ 1.13
CLN6-220ENST00000637450 SENP6Q9GZR1 1112 aaPredicted RBP22.12■■□□□ 1.13
CLN6-220ENST00000637450 FBXO28Q9NVF7 368 aa22.12■■□□□ 1.13
CLN6-220ENST00000637450 DNAH12Q6ZR08 3092 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms