RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
CLN6-219ENST00000637329 ABCB5Q2M3G0 1257 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 FBXO18Q8NFZ0 1043 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 PHKBQ93100 1093 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 ALG1Q9BT22 464 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 SLC26A6Q9BXS9 759 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 TMEM39BQ9GZU3 492 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 NYAP2Q9P242 653 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 HACL1Q9UJ83 578 aa17.81■□□□□ 0.44
CLN6-219ENST00000637329 PRPF3O43395 683 aaKnown RBP17.8■□□□□ 0.44
CLN6-219ENST00000637329 SNHG28P0DPA3 235 aa17.8■□□□□ 0.44
CLN6-219ENST00000637329 AKAP17AQ02040 695 aaKnown RBP17.8■□□□□ 0.44
CLN6-219ENST00000637329 TRIM29Q14134 588 aa17.8■□□□□ 0.44
CLN6-219ENST00000637329 RASA3Q14644 834 aa17.8■□□□□ 0.44
CLN6-219ENST00000637329 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
CLN6-219ENST00000637329 CABP5Q9NP86 173 aa17.8■□□□□ 0.44
CLN6-219ENST00000637329 MYH15Q9Y2K3 1946 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 MYH4Q9Y623 1939 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 FAM196BA6NMK8 535 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 ICA1Q05084 483 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 RESTQ13127 1097 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 ASPRV1Q53RT3 343 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
CLN6-219ENST00000637329 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
CLN6-219ENST00000637329 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
CLN6-219ENST00000637329 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
CLN6-219ENST00000637329 MKL1Q969V6 931 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
CLN6-219ENST00000637329 GINM1Q9NU53 330 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 MAD2L2Q9UI95 211 aa17.79■□□□□ 0.44
CLN6-219ENST00000637329 PALM3A6NDB9 673 aaPredicted RBP17.78■□□□□ 0.44
CLN6-219ENST00000637329 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 DTNBO60941 627 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 PARP1P09874 1014 aaKnown RBP17.78■□□□□ 0.44
CLN6-219ENST00000637329 XBP1P17861 261 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 CTCFP49711 727 aaPredicted RBP17.78■□□□□ 0.44
CLN6-219ENST00000637329 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
CLN6-219ENST00000637329 MYH6P13533 1939 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 PDHBP11177 359 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 GPATCH4Q5T3I0 446 aaKnown RBP17.77■□□□□ 0.44
CLN6-219ENST00000637329 ATL3Q6DD88 541 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 BRAPQ7Z569 592 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
CLN6-219ENST00000637329 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 CLIP2Q9UDT6 1046 aa17.77■□□□□ 0.44
CLN6-219ENST00000637329 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
CLN6-219ENST00000637329 GDF11O95390 407 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 GUCY1A2P33402 732 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 EPS15P42566 896 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 NBR1Q14596 966 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 ANGEL2Q5VTE6 544 aaKnown RBP17.76■□□□□ 0.43
CLN6-219ENST00000637329 DCAF15Q66K64 600 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 MCTP1Q6DN14 999 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 LRRC47Q8N1G4 583 aaKnown RBP17.76■□□□□ 0.43
CLN6-219ENST00000637329 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 DEFB129Q9H1M3 183 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 CREBZFQ9NS37 354 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 GGA3Q9NZ52 723 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
CLN6-219ENST00000637329 SCN4AP35499 1836 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 ATAD5Q96QE3 1844 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 GH2P01242 217 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
CLN6-219ENST00000637329 KRT85P78386 507 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 SEPT2Q15019 361 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 KRT40Q6A162 431 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 SH2D4AQ9H788 454 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 ARHGEF10LQ9HCE6 1279 aa17.75■□□□□ 0.43
CLN6-219ENST00000637329 ASTN2O75129 1339 aaPredicted RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 DOCK1Q14185 1865 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 FOXN1O15353 648 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 MMP1P03956 469 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 ASNSP08243 561 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 SCG2P13521 617 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 CAP2P40123 477 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 KIF23Q02241 960 aaPredicted RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 MLLT1Q03111 559 aaPredicted RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLN6-219ENST00000637329 PKN1Q16512 942 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 SKOR2Q2VWA4 1001 aaPredicted RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 CDAN1Q8IWY9 1227 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
CLN6-219ENST00000637329 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
CLN6-219ENST00000637329 AIFM3Q96NN9 605 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms