RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TNRC6CQ9HCJ0 1690 aaKnown RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 SLFN14P0C7P3 912 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 TSPY3P0CV98 308 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 TSPY8P0CW00 308 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 CYP2D6P10635 497 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 CFAP100Q494V2 611 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 GALNT17Q6IS24 598 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 TNFRSF25Q93038 417 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 EP400Q96L91 3159 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
CLN8-212ENST00000637083 RIOK3O14730 519 aaKnown RBP13.82□□□□□ -0.2
CLN8-212ENST00000637083 GYS1P13807 737 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
CLN8-212ENST00000637083 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 PNMA1Q8ND90 353 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
CLN8-212ENST00000637083 NMT2O60551 498 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 RBM10P98175 930 aaKnown RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 GRIN1Q05586 938 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 GRM4Q14833 912 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 ARID5BQ14865 1188 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 SYCP1Q15431 976 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 GLIPR1L2Q4G1C9 344 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 SERPINB2P05120 415 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
CLN8-212ENST00000637083 IL1R1P14778 569 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 PLCD1P51178 756 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 EVX2Q03828 476 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 PDILTQ8N807 584 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 CD209Q9NNX6 404 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 FANCLQ9NW38 375 aa13.81□□□□□ -0.2
CLN8-212ENST00000637083 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 FOXN1O15353 648 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 UFL1O94874 794 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 TXLNAP40222 546 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 GPSM2P81274 684 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 ZNF174Q15697 407 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 VSTM4Q8IW00 320 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 BLIDQ8IZY5 108 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 DHX58Q96C10 678 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 GPR75-ASB3A0A0A6YYF3 556 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 ATP1A3P13637 1013 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 PTGDRQ13258 359 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 NPY5RQ15761 445 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 CCDC12Q8WUD4 166 aaPredicted RBP13.8□□□□□ -0.2
CLN8-212ENST00000637083 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
CLN8-212ENST00000637083 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
CLN8-212ENST00000637083 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
CLN8-212ENST00000637083 FAM205CA6NFA0 338 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 CTIFO43310 598 aaKnown RBP13.79□□□□□ -0.2
CLN8-212ENST00000637083 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
CLN8-212ENST00000637083 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
CLN8-212ENST00000637083 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
CLN8-212ENST00000637083 ARMCX5Q6P1M9 558 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 RTFDC1Q9BY42 306 aaPredicted RBP13.79□□□□□ -0.2
CLN8-212ENST00000637083 IL17RBQ9NRM6 502 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 NFE2L3Q9Y4A8 694 aa13.79□□□□□ -0.2
CLN8-212ENST00000637083 VWA3AA6NCI4 1184 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 BMP6P22004 513 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 BTDP43251 543 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 DAGLBQ8NCG7 672 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 EPSTI1Q96J88 318 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
CLN8-212ENST00000637083 CCDC194A0A1B0GVG4 234 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 TRIM37O94972 964 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 GRIK5Q16478 980 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
CLN8-212ENST00000637083 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms