RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ADCY7P51828 1080 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 MYL5Q02045 173 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 BMS1Q14692 1282 aaKnown RBP8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 LETM2Q2VYF4 491 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 SLFN13Q68D06 897 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 LEKR1Q6ZMV7 388 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 ZSWIM5Q9P217 1185 aa8.68□□□□□ -1.02
CACNA1D-220ENST00000636999 KARSQ15046 597 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 STXBP4Q6ZWJ1 553 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 CPXCR1Q8N123 301 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 LRRC47Q8N1G4 583 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 ELP1O95163 1332 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 EIF3JO75822 258 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 FANCCQ00597 558 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 NONOQ15233 471 aaKnown RBP eCLIP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 PNMA2Q9UL42 364 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 TOPAZ1Q8N9V7 1692 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 CYP2D7A0A087X1C5 515 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 RRAGBQ5VZM2 374 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 XPO4Q9C0E2 1151 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 RNF216Q9NWF9 866 aaPredicted RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 RMND1Q9NWS8 449 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 CWC15Q9P013 229 aaKnown RBP8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 PNPLA7Q6ZV29 1317 aa8.67□□□□□ -1.02
CACNA1D-220ENST00000636999 DPEP1P16444 411 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 CDK8P49336 464 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 CHMP4BP1P59074 171 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 TRMT1LQ7Z2T5 733 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 NSUN7Q8NE18 718 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 VPS54Q9P1Q0 977 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 KCNH3Q9ULD8 1083 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 SRGNP10124 158 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 GTF2F1P35269 517 aaKnown RBP eCLIP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 ZNF174Q15697 407 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 ASPRV1Q53RT3 343 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 PTF1AQ7RTS3 328 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 STAG1Q8WVM7 1258 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 TDRD3Q9H7E2 651 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 hCG_1642624A0A1W2PR95 340 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 GOLGA6L9A6NEM1 432 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 MATR3P43243 847 aaKnown RBP eCLIP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 ADALQ6DHV7 355 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 DGKHQ86XP1 1220 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 IQUBQ8NA54 791 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 TMEM87AQ8NBN3 555 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 ZNF397Q8NF99 534 aaPredicted RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 TDRD7Q8NHU6 1098 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 KIAA1524Q8TCG1 905 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 MTA3Q9BTC8 594 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 LZTFL1Q9NQ48 299 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 IVNS1ABPQ9Y6Y0 642 aa8.66□□□□□ -1.02
CACNA1D-220ENST00000636999 TBCAO75347 108 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 SCG2P13521 617 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 ELF2Q15723 593 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 C11orf57Q6ZUT1 292 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 RNF26Q9BY78 433 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 ZNF609O15014 1411 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 SMCO2A6NFE2 343 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 POLRMTO00411 1230 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 SH2B2O14492 632 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 POLR2DO15514 142 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 YEATS4O95619 227 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 NDUFA8P51970 172 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 TOB2Q14106 344 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 TTC38Q5R3I4 469 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 GALNT17Q6IS24 598 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 GPHNQ9NQX3 736 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 CLIC4Q9Y696 253 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 GSG1L2A8MUP6 293 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 CFBP00751 764 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 PFKFB1P16118 471 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 TGFB2P61812 414 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 USH1GQ495M9 461 aa8.65□□□□□ -1.02
CACNA1D-220ENST00000636999 NSMFQ6X4W1 530 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms