RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ALS2Q96Q42 1657 aa16.71■□□□□ 0.27
CACNA1A-220ENST00000635988 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.26
CACNA1A-220ENST00000635988 A0A087X0B3 334 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 NDUFA10O95299 355 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 GNAT2P19087 354 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 ICE2Q659A1 982 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 UBR2Q8IWV8 1755 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 DNAJC21Q5F1R6 531 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 NCAPH2Q6IBW4 605 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 BRMS1Q9HCU9 246 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 INCENPQ9NQS7 918 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 COL18A1P39060 1754 aa16.7■□□□□ 0.26
CACNA1A-220ENST00000635988 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 KRT2P35908 639 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 FOXR1Q6PIV2 292 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 ZNF662Q6ZS27 426 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 PDE8BO95263 885 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 ABL1P00519 1130 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 ITGA6P23229 1130 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 PAK1Q13153 545 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 COG1Q8WTW3 980 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 VPS16Q9H269 839 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 YY1AP1Q9H869 796 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 RMND1Q9NWS8 449 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 HPCAL4Q9UM19 191 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 KCPQ6ZWJ8 1503 aa16.69■□□□□ 0.26
CACNA1A-220ENST00000635988 MBD4O95243 580 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 TFRCP02786 760 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 STIM1Q13586 685 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 RRAGBQ5VZM2 374 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 KIF6Q6ZMV9 814 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 TOMM22Q9NS69 142 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 GUCA1BQ9UMX6 200 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 KCNJ18B7U540 433 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 KRT83P78385 493 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 KCNJ12Q14500 433 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 RTL9Q8NET4 1388 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 C1orf167Q5SNV9 1468 aa16.68■□□□□ 0.26
CACNA1A-220ENST00000635988 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 UBAC1Q9BSL1 405 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 CRACR2AQ9BSW2 395 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 GSG1L2A8MUP6 293 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 GTPBP6O43824 516 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 CPP00450 1065 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 CASP1P29466 404 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 PHKA1P46020 1223 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 TDO2P48775 406 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 GTF2A1P52655 376 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 IQCEQ6IPM2 695 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
CACNA1A-220ENST00000635988 H7C1D1 291 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 UBXN1Q04323 297 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 ZNF658Q5TYW1 1059 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 TACC3Q9Y6A5 838 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 CHD4Q14839 1912 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 A0A1W2PQC6 194 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 KRT86O43790 486 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 CCDC70Q6NSX1 233 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 PACS2Q86VP3 889 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 LPIN2Q92539 896 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 DNAJC7Q99615 494 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 ZKSCAN3Q9BRR0 538 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 LUC7L2Q9Y383 392 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
CACNA1A-220ENST00000635988 A0A087WUV0 522 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 RNF225M0QZC1 329 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 CDC25AP30304 524 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 CTSWP56202 376 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms