RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ZNF518AQ6AHZ1 1483 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 STX10O60499 249 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 PRDM1O75626 825 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 STX2P32856 288 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 N4BP2L2Q92802 583 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 USP44Q9H0E7 712 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 NUCKS1Q9H1E3 243 aaKnown RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 ASIC3Q9UHC3 531 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 FAN1Q9Y2M0 1017 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 TRPM2O94759 1503 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 KRT5P13647 590 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 APBA1Q02410 837 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 MGARPQ8TDB4 240 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 LARSQ9P2J5 1176 aaKnown RBP12.92□□□□□ -0.34
COL11A1-211ENST00000635193 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 HYOU1Q9Y4L1 999 aa12.92□□□□□ -0.34
COL11A1-211ENST00000635193 MYO1CO00159 1063 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 IFT88Q13099 833 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 MORC3Q14149 939 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 DYMQ7RTS9 669 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
COL11A1-211ENST00000635193 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
COL11A1-211ENST00000635193 HAUS4Q9H6D7 363 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 CTTNBP2NLQ9P2B4 639 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 HOMER3Q9NSC5 361 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 FAM169AQ9Y6X4 670 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 SRGAP1Q7Z6B7 1085 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 CABP7Q86V35 215 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 NOSTRINQ8IVI9 506 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 ANKRD42Q8N9B4 389 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-211ENST00000635193 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL11A1-211ENST00000635193 TTC19Q6DKK2 380 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-211ENST00000635193 SNX29Q8TEQ0 813 aa12.91□□□□□ -0.34
COL11A1-211ENST00000635193 ZAP70P43403 619 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 CUL4AQ13619 759 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 PSMD6Q15008 389 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF827Q17R98 1081 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 FAF1Q9UNN5 650 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-211ENST00000635193 GCP02774 474 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 MMS22LQ6ZRQ5 1243 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 DPH6Q7L8W6 267 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 KRT25Q7Z3Z0 450 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 GMNNO75496 209 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 MAGEA9P43362 315 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 CLCN6P51797 869 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 IRX4P78413 519 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 HERC4Q5GLZ8 1057 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-211ENST00000635193 MIER3Q7Z3K6 550 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 NLRC4Q9NPP4 1024 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 CDC23Q9UJX2 597 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 PABPN1LA6NDY0 278 aaKnown RBP12.9□□□□□ -0.34
COL11A1-211ENST00000635193 KRT15P19012 456 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 SESN3P58005 492 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
COL11A1-211ENST00000635193 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
COL11A1-211ENST00000635193 A0A1W2PQ27 194 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 A0A1W2PQ64 194 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 A0A1W2PQD8 194 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 I3L4J1 428 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 IL2RBP14784 551 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 RASEFQ8IZ41 740 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 CLIC4Q9Y696 253 aa12.9□□□□□ -0.35
COL11A1-211ENST00000635193 TROVE2P10155 538 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 AGTPBP1Q9UPW5 1226 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 DBN1Q16643 649 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 ADCK5Q3MIX3 580 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 GPCPD1Q9NPB8 672 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 ZNF521Q96K83 1311 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 DNM2P50570 870 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 OSBPL3Q9H4L5 887 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 VCX3AQ9NNX9 186 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 SSX2IPQ9Y2D8 614 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 SCRN1Q12765 414 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms