RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HID1Q8IV36 788 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 PIWIL2Q8TC59 973 aaKnown RBP4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 TEPSINQ96N21 525 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 G6PC3Q9BUM1 346 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 BDH2Q9BUT1 245 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 MTMR7Q9Y216 660 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 IRAK3Q9Y616 596 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 MROH2BQ7Z745 1585 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 ERCC6Q03468 1493 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 RTP5Q14D33 572 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 SPATS1Q496A3 300 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 WIPI1Q5MNZ9 446 aaPredicted RBP4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 TSPYL5Q86VY4 417 aaPredicted RBP4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 OXR1Q8N573 874 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 PPP1R13LQ8WUF5 828 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 ALKBH8Q96BT7 664 aaKnown RBP4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 TRAIPQ9BWF2 469 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 NLRP2Q9NX02 1062 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 TJP2Q9UDY2 1190 aa4.38□□□□□ -1.71
SMARCB1-208ENST00000634926 WDR62O43379 1518 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 GFRA2O00451 464 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 PPP1R15AO75807 674 aaPredicted RBP4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 VIPR1P32241 457 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 CDR1P51861 262 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 TEKQ02763 1124 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 PLP2Q04941 152 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 PCNX4Q63HM2 1172 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 ZNF746Q6NUN9 644 aaPredicted RBP4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 NLRX1Q86UT6 975 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 TMC1Q8TDI8 760 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 LINC01599Q8WXQ3 324 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 CITED4Q96RK1 184 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 GPR62Q9BZJ7 368 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 PPP4R2Q9NY27 417 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 ZNF281Q9Y2X9 895 aa4.37□□□□□ -1.71
SMARCB1-208ENST00000634926 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 ZBTB7CA1YPR0 619 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 OVOL3O00110 214 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 N4BP3O15049 544 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 TNFRSF1AP19438 455 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 CYP7A1P22680 504 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 ADGRF1Q5T601 910 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 HDXQ7Z353 690 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 FAM129CQ86XR2 697 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 DTWD2Q8NBA8 298 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 CRELD1Q96HD1 420 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 SETDB2Q96T68 719 aa4.36□□□□□ -1.71
SMARCB1-208ENST00000634926 OR14I1A6ND48 311 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 SNX17Q15036 470 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 LRRC14Q15048 493 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 FRMD5Q7Z6J6 570 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 IGDCC3Q8IVU1 814 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 VWCEQ96DN2 955 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 BORCS6Q96GS4 357 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 COX4I2Q96KJ9 171 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 LUC7LQ9NQ29 371 aaKnown RBP4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 CYP8B1Q9UNU6 501 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 MYRFQ9Y2G1 1151 aa4.35□□□□□ -1.71
SMARCB1-208ENST00000634926 ZC3H12DA2A288 527 aaKnown RBP4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 CILPO75339 1184 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 LTKP29376 864 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 KIR3DS1Q14943 382 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 SCARA3Q6AZY7 606 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 MRPL41Q8IXM3 137 aaKnown RBP4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 TMEM87BQ96K49 555 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 CEP44Q9C0F1 390 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 GPATCH2Q9NW75 528 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 SNCAIPQ9Y6H5 919 aa4.34□□□□□ -1.71
SMARCB1-208ENST00000634926 PRDM2Q13029 1718 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 WIZO95785 1651 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 FFAR3O14843 346 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 USP2O75604 605 aaPredicted RBP4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 ZXDAP98168 799 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 PDE4CQ08493 712 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 DSC3Q14574 896 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 CNKSR3Q6P9H4 555 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 TMC7Q7Z402 723 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 SP8Q8IXZ3 490 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 LINC01356Q8N9X3 169 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 RETREG2Q8NC44 543 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 MZB1Q8WU39 189 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 RBCK1Q9BYM8 510 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 TRIT1Q9H3H1 467 aaKnown RBP4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 SIRT5Q9NXA8 310 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 CEP131Q9UPN4 1083 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 SAMM50Q9Y512 469 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 PCDHB5Q9Y5E4 795 aa4.33□□□□□ -1.72
SMARCB1-208ENST00000634926 MRC2Q9UBG0 1479 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 PNMA6FA0A0J9YX94 578 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 MATN3O15232 486 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 GSTT1P30711 240 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 NCKAP1LP55160 1127 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 SEPT6Q14141 434 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 SPPL2CQ8IUH8 684 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 ANKS4BQ8N8V4 417 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 SLC16A11Q8NCK7 471 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 DHX38Q92620 1227 aaKnown RBP4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 ACSF2Q96CM8 615 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms