RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 GUCY1A2P33402 732 aa18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 EVX2Q03828 476 aa18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 TTF1Q15361 905 aaPredicted RBP18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 DPP9Q86TI2 863 aa18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 NPLOC4Q8TAT6 608 aa18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 FRMPD3Q5JV73 1810 aa18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 SMARCA5O60264 1052 aaPredicted RBP18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 COG2Q14746 738 aa18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 SDR42E1Q8WUS8 393 aa18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 TANGO6Q9C0B7 1094 aa18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
SNRNP48-203ENST00000634363 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 NAV1Q8NEY1 1877 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 GOLIM4O00461 696 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 PDE6AP16499 860 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 GPR153Q6NV75 609 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 TMED8Q6PL24 325 aaPredicted RBP18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 LBX2Q6XYB7 198 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 HOXC10Q9NYD6 342 aa18.74■□□□□ 0.59
SNRNP48-203ENST00000634363 A0A1W2PRG0 241 aa18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 GABPAQ06546 454 aa18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 GRB14Q14449 540 aa18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 PLS1Q14651 629 aa18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
SNRNP48-203ENST00000634363 MSCO60682 206 aa18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 CYP2D6P10635 497 aa18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 GJC2Q5T442 439 aaPredicted RBP18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 ANO1Q5XXA6 986 aa18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 SLC44A5Q8NCS7 719 aa18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 LPAR1Q92633 364 aa18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 MOV10L1Q9BXT6 1211 aaKnown RBP18.72■□□□□ 0.59
SNRNP48-203ENST00000634363 HOXC6P09630 235 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 ADORA2AP29274 412 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 TRPV1Q8NER1 839 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 DYNLL2Q96FJ2 89 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 ARMT1Q9H993 441 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 DCP1AQ9NPI6 582 aaPredicted RBP18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 MTMR10Q9NXD2 777 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 PRKAG2Q9UGJ0 569 aa18.71■□□□□ 0.59
SNRNP48-203ENST00000634363 MYH8P13535 1937 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 STRNO43815 780 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 ERCC3P19447 782 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 ANKRD45Q5TZF3 282 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 NCAPG2Q86XI2 1143 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 SPATC1LQ9H0A9 340 aa18.7■□□□□ 0.58
SNRNP48-203ENST00000634363 DNM1LO00429 736 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 FLOT1O75955 427 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 PRAMEF19Q5SWL8 479 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 TMEM179Q6ZVK1 233 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 CLEC10AQ8IUN9 316 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 ARRDC4Q8NCT1 418 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 ARHGEF10LQ9HCE6 1279 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 ATP11BQ9Y2G3 1177 aa18.69■□□□□ 0.58
SNRNP48-203ENST00000634363 BAZ2AQ9UIF9 1905 aaKnown RBP18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 TCRBV5S4A2TA0A5A2 114 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 PRKAB2O43741 272 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 COBLO75128 1261 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 CYBAP13498 195 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 ATP5JP18859 108 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 RTP1P59025 263 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 BOLA2Q9H3K6 86 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 ECHDC1Q9NTX5 307 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 SLC5A4Q9NY91 659 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 STXBP5LQ9Y2K9 1186 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 LAMA3Q16787 3333 aa18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 ZNFX1Q9P2E3 1918 aaKnown RBP18.68■□□□□ 0.58
SNRNP48-203ENST00000634363 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 MBD4O95243 580 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 AKR1B1P15121 316 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 DSG3P32926 999 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 OLFML2BQ68BL8 750 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 ATG4CQ96DT6 458 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 FAM161BQ96MY7 647 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 PAG1Q9NWQ8 432 aa18.67■□□□□ 0.58
SNRNP48-203ENST00000634363 RLFQ13129 1914 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 RAD21O60216 631 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 IGHDP01880 384 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 ICA1Q05084 483 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 SLC39A5Q6ZMH5 540 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 MB21D1Q8N884 522 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 SHCBP1Q8NEM2 672 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 MROH8Q9H579 483 aa18.66■□□□□ 0.58
SNRNP48-203ENST00000634363 PRDM5Q9NQX1 630 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms