RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 NOL9Q5SY16 702 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 CATIPQ7Z7H3 387 aa16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 FANCBQ8NB91 859 aa16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
PHACTR4-209ENST00000633371 USP17L5A8MUK1 530 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 ASNSP08243 561 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 SNHG28P0DPA3 235 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 METAP2P50579 478 aaKnown RBP eCLIP16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 STAG2Q8N3U4 1231 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 NUP133Q8WUM0 1156 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
PHACTR4-209ENST00000633371 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 PTPRAP18433 802 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 ATP2B2Q01814 1243 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 RTN1Q16799 776 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 CHADLQ6NUI6 762 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 MAP3K14Q99558 947 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 MAD2L2Q9UI95 211 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 PARP14Q460N5 1801 aa16.6■□□□□ 0.25
PHACTR4-209ENST00000633371 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 PDHBP11177 359 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 VGLL4Q14135 290 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 LDLRAD1Q5T700 205 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 SRBD1Q8N5C6 995 aaKnown RBP16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
PHACTR4-209ENST00000633371 RLFQ13129 1914 aa16.58■□□□□ 0.25
PHACTR4-209ENST00000633371 SMCHD1A6NHR9 2005 aa16.58■□□□□ 0.25
PHACTR4-209ENST00000633371 PPP1R12BO60237 982 aaPredicted RBP16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 CALM1P0DP23 149 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 CALM2P0DP24 149 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 CALM3P0DP25 149 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 CST9Q5W186 159 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 TMTC3Q6ZXV5 915 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 WDR18Q9BV38 432 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 MTMR7Q9Y216 660 aa16.58■□□□□ 0.24
PHACTR4-209ENST00000633371 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 F5H6K3 240 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 NDUFB10O96000 172 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 GOLGA8HP0CJ92 632 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 IFNAR1P17181 557 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 KLRC3Q07444 240 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 PPP4R3BQ5MIZ7 849 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 GPBP1L1Q9HC44 474 aaPredicted RBP16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
PHACTR4-209ENST00000633371 CYTH3O43739 400 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 GJB2P29033 226 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 NF2P35240 595 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 DGKZQ13574 1117 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 PHKBQ93100 1093 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 DDX11Q96FC9 970 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
PHACTR4-209ENST00000633371 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 CNTNAP5Q8WYK1 1306 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 PASKQ96RG2 1323 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 GJA5P36382 358 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 CTCFLQ8NI51 663 aaPredicted RBP16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 VCPKMTQ9H867 229 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 ZNF408Q9H9D4 720 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 RBM28Q9NW13 759 aaKnown RBP16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 LOC285556D6RIA3 1793 aa16.55■□□□□ 0.24
PHACTR4-209ENST00000633371 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 SPP2Q13103 211 aa16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 PKP1Q13835 747 aa16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 PKN1Q16512 942 aa16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
PHACTR4-209ENST00000633371 ARMC9Q7Z3E5 817 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms