RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ADORA2AP29274 412 aa18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 GUCY1A2P33402 732 aa18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 OLFML2BQ68BL8 750 aa18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 COL25A1Q9BXS0 654 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 MOV10L1Q9BXT6 1211 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 TANGO6Q9C0B7 1094 aa18.99■□□□□ 0.63
PDLIM3-213ENST00000629667 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 SLC39A5Q6ZMH5 540 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 SPATC1LQ9H0A9 340 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 PRDM5Q9NQX1 630 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 SLC5A4Q9NY91 659 aa18.98■□□□□ 0.63
PDLIM3-213ENST00000629667 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 A0A1W2PRG0 241 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 SEPT4O43236 478 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 IGHA2P01877 340 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 ERCC3P19447 782 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 GABPAQ06546 454 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 AACSQ86V21 672 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 SHCBP1Q8NEM2 672 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 CRNKL1Q9BZJ0 848 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 MCM9Q9NXL9 1143 aa18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 ZNFX1Q9P2E3 1918 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-213ENST00000629667 PLS1Q14651 629 aa18.96■□□□□ 0.63
PDLIM3-213ENST00000629667 TTF1Q15361 905 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-213ENST00000629667 ERC1Q8IUD2 1116 aa18.96■□□□□ 0.63
PDLIM3-213ENST00000629667 EYSQ5T1H1 3165 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 COBLO75128 1261 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 SHHQ15465 462 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 NCAPG2Q86XI2 1143 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 MROH8Q9H579 483 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 EXOC6BQ9Y2D4 811 aa18.95■□□□□ 0.62
PDLIM3-213ENST00000629667 FLOT1O75955 427 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 EVX2Q03828 476 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 TRIM60Q495X7 471 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 PRAMEF19Q5SWL8 479 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 TMEM179Q6ZVK1 233 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 BADQ92934 168 aa18.94■□□□□ 0.62
PDLIM3-213ENST00000629667 SMCHD1A6NHR9 2005 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 PDE6AP16499 860 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 DSG3P32926 999 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 ADCYAP1R1P41586 468 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 SNX17Q15036 470 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 C9orf50Q5SZB4 431 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 ABRAQ8N0Z2 381 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 SDR42E1Q8WUS8 393 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 FERMT2Q96AC1 680 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 CDX2Q99626 313 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 ARHGEF10LQ9HCE6 1279 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 SWAP70Q9UH65 585 aa18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-213ENST00000629667 FCER1AP12319 257 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 LRRC41Q15345 812 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 SH2D4AQ9H788 454 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 IL1RAPL2Q9NP60 686 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 DCP1AQ9NPI6 582 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 PDLIM7Q9NR12 457 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 ZNF532Q9HCE3 1301 aa18.92■□□□□ 0.62
PDLIM3-213ENST00000629667 PLXNA1Q9UIW2 1896 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 RLBP1P12271 317 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 FAM47AQ5JRC9 791 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 SPICE1Q8N0Z3 855 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 SEMA6BQ9H3T3 888 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 BAZ2AQ9UIF9 1905 aaKnown RBP18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 VCANP13611 3396 aa18.91■□□□□ 0.62
PDLIM3-213ENST00000629667 GOLIM4O00461 696 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 CYP2D6P10635 497 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 SMAD3P84022 425 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 ICA1Q05084 483 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 C1orf53Q5VUE5 145 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 SH3RF1Q7Z6J0 888 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 LCORLQ8N3X6 602 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 MAFAQ8NHW3 353 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 DYNLL2Q96FJ2 89 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 VCPKMTQ9H867 229 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 TMX2Q9Y320 296 aa18.9■□□□□ 0.62
PDLIM3-213ENST00000629667 CDH23Q9H251 3354 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 TRIM43BA6NCK2 446 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 SLC25A27O95847 323 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 RARBP10826 455 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 RHPN1Q8TCX5 695 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 XPNPEP3Q9NQH7 507 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 TACC3Q9Y6A5 838 aa18.89■□□□□ 0.61
PDLIM3-213ENST00000629667 TCRBV5S4A2TA0A5A2 114 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms