RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 CAPN2P17655 700 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 ZMYM1Q5SVZ6 1142 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 GPR142Q7Z601 462 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 PLEKHH3Q7Z736 793 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 CLEC10AQ8IUN9 316 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 MKNK2Q9HBH9 465 aa20.56■□□□□ 0.88
SPTAN1-214ENST00000628614 PATL2C9JE40 543 aaKnown RBP20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 XRCC5P13010 732 aaKnown RBP20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 PDE1AP54750 535 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 COG2Q14746 738 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 SIAH1Q8IUQ4 282 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 U2AF1L4Q8WU68 220 aaKnown RBP20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 EVI5LQ96CN4 794 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 SEC62Q99442 399 aaKnown RBP20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 ZNF287Q9HBT7 754 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 HOXC10Q9NYD6 342 aa20.55■□□□□ 0.88
SPTAN1-214ENST00000628614 DOCK3Q8IZD9 2030 aa20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 EEF2P13639 858 aaKnown RBP20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 CYP2B6P20813 491 aa20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 PAK6Q9NQU5 681 aaPredicted RBP20.54■□□□□ 0.88
SPTAN1-214ENST00000628614 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 SGPL1O95470 568 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 RASA1P20936 1047 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 RGS2P41220 211 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 KIAA1755Q5JYT7 1200 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 MORN1Q5T089 497 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 SMC5Q8IY18 1101 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 SPICE1Q8N0Z3 855 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 MB21D1Q8N884 522 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 USP6NLQ92738 828 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 GOPCQ9HD26 462 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 BTBD7Q9P203 1132 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 PLXNB2O15031 1838 aa20.53■□□□□ 0.88
SPTAN1-214ENST00000628614 FLOT1O75955 427 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 WDR78Q5VTH9 848 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 STK11IPQ8N1F8 1099 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 TRIB2Q92519 343 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 APBA2Q99767 749 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 LNPKQ9C0E8 428 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 NAPBQ9H115 298 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 IVNS1ABPQ9Y6Y0 642 aa20.52■□□□□ 0.88
SPTAN1-214ENST00000628614 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
SPTAN1-214ENST00000628614 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
SPTAN1-214ENST00000628614 TICAM2Q86XR7 235 aa20.51■□□□□ 0.87
SPTAN1-214ENST00000628614 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
SPTAN1-214ENST00000628614 HMX1Q9NP08 348 aaPredicted RBP20.51■□□□□ 0.87
SPTAN1-214ENST00000628614 SLC15A5A6NIM6 579 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 DSG3P32926 999 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 MAP2K5Q13163 448 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 UBE2Q1Q7Z7E8 422 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 ZNF444Q8N0Y2 327 aaPredicted RBP20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 NYAP2Q9P242 653 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 A0A0G2JMZ2 1700 aa20.5■□□□□ 0.87
SPTAN1-214ENST00000628614 GREB1LQ9C091 1923 aaPredicted RBP20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 FARP2O94887 1054 aaPredicted RBP20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 TFRCP02786 760 aaKnown RBP20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 PTPREP23469 700 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 PDE4BQ07343 736 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 TRIM32Q13049 653 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 SPATC1LQ9H0A9 340 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 CRISPLD2Q9H0B8 497 aa20.49■□□□□ 0.87
SPTAN1-214ENST00000628614 RAD21O60216 631 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 PRKAR2AP13861 404 aaKnown RBP20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 GRB14Q14449 540 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 SHCBP1Q8NEM2 672 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 ATG4CQ96DT6 458 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 MOV10L1Q9BXT6 1211 aaKnown RBP20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 HELLSQ9NRZ9 838 aa20.48■□□□□ 0.87
SPTAN1-214ENST00000628614 PRDM1O75626 825 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 IGHDP01880 384 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 NUCB1Q02818 461 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 PPARAQ07869 468 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 CCDC129Q6ZRS4 1044 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 RLFQ13129 1914 aa20.47■□□□□ 0.87
SPTAN1-214ENST00000628614 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 STRNO43815 780 aa20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 PLS1Q14651 629 aa20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 CCL14Q16627 93 aa20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
SPTAN1-214ENST00000628614 TRIM6-TRIM34B2RNG4 842 aa20.45■□□□□ 0.86
SPTAN1-214ENST00000628614 HOXC6P09630 235 aa20.45■□□□□ 0.86
SPTAN1-214ENST00000628614 TSPY3P0CV98 308 aa20.45■□□□□ 0.86
SPTAN1-214ENST00000628614 TSPY8P0CW00 308 aa20.45■□□□□ 0.86
SPTAN1-214ENST00000628614 ERCC3P19447 782 aa20.45■□□□□ 0.86
SPTAN1-214ENST00000628614 CACNB2Q08289 660 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms