RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 FOXO4P98177 505 aa10.36□□□□□ -0.75
SPTAN1-212ENST00000627441 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-212ENST00000627441 GCKRQ14397 625 aa10.36□□□□□ -0.75
SPTAN1-212ENST00000627441 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-212ENST00000627441 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
SPTAN1-212ENST00000627441 H3BQ06 376 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 PRDX5P30044 214 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 TMEM67Q5HYA8 995 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 LDHAL6AQ6ZMR3 332 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 PBXIP1Q96AQ6 731 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 CNNM1Q9NRU3 951 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
SPTAN1-212ENST00000627441 ZNF536O15090 1300 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 MYADML2A6NDP7 307 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 RBAK-RBAKDNI3L0D1 243 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 COBLO75128 1261 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 ADAMTS4O75173 837 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 TAL1P17542 331 aaPredicted RBP10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 ACLYP53396 1101 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 PICALMQ13492 652 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 BMP8AQ7Z5Y6 402 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 FSD1Q9BTV5 496 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 MTIF3Q9H2K0 278 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
SPTAN1-212ENST00000627441 GPR179Q6PRD1 2367 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 TMEM221A6NGB7 291 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 USP17L5A8MUK1 530 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 M0R296 226 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 ENTPD3O75355 529 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 ADORA2AP29274 412 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 CDK7P50613 346 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 CCL23P55773 120 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 BACE1P56817 501 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 TTLL4Q14679 1199 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 DGLUCYQ7Z3D6 616 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 VPS37DQ86XT2 251 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 FAM126BQ8IXS8 530 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 IDI2Q9BXS1 227 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 OSBPL5Q9H0X9 879 aaPredicted RBP10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 WNT8AQ9H1J5 351 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 FAM208BQ5VWN6 2430 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
SPTAN1-212ENST00000627441 FRYLO94915 3013 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 LCHNA4D1U4 455 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 CAP2P40123 477 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 ST3GAL2Q16842 350 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 HERC4Q5GLZ8 1057 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 RNF180Q86T96 592 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 ADSSL1Q8N142 457 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 NEK9Q8TD19 979 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 PRRX2Q99811 253 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 TMOD4Q9NZQ9 345 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 TIMELESSQ9UNS1 1208 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 SUGT1Q9Y2Z0 365 aa10.32□□□□□ -0.76
SPTAN1-212ENST00000627441 GLRX3O76003 335 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 RARBP10826 455 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 ACAP1Q15027 740 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 LMBR1LQ6UX01 489 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 G2E3Q7L622 706 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 DPP9Q86TI2 863 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 ADHFE1Q8IWW8 467 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 FBXL6Q8N531 539 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 EDAQ92838 391 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 SCLYQ96I15 445 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 RABGAP1Q9Y3P9 1069 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 SYNRGQ9UMZ2 1314 aa10.31□□□□□ -0.76
SPTAN1-212ENST00000627441 CD4P01730 458 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 KCNA10Q16322 511 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 RNF135Q8IUD6 432 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 WDR18Q9BV38 432 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 MCM3APO60318 1980 aa10.3□□□□□ -0.76
SPTAN1-212ENST00000627441 MYO7AQ13402 2215 aa10.29□□□□□ -0.76
SPTAN1-212ENST00000627441 TBC1D12O60347 775 aa10.29□□□□□ -0.76
SPTAN1-212ENST00000627441 NBL1P41271 181 aa10.29□□□□□ -0.76
SPTAN1-212ENST00000627441 CCNA1P78396 465 aa10.29□□□□□ -0.76
SPTAN1-212ENST00000627441 TAF7LQ5H9L4 462 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms