RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 RPAP3Q9H6T3 665 aaPredicted RBP10.92□□□□□ -0.66
NELFE-214ENST00000625905 VCPKMTQ9H867 229 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 TRIM17Q9Y577 477 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 NEDD4P46934 1319 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 WDR46O15213 610 aaKnown RBP10.91□□□□□ -0.66
NELFE-214ENST00000625905 CDC45O75419 566 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 TTLL1O95922 423 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 BCRP11274 1271 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 HERVK_113P62684 666 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 ARHGEF6Q15052 776 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 FAM110CQ1W6H9 321 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 MFSD6Q6ZSS7 791 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
NELFE-214ENST00000625905 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
NELFE-214ENST00000625905 MCOLN1Q9GZU1 580 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 MTMR4Q9NYA4 1195 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
NELFE-214ENST00000625905 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
NELFE-214ENST00000625905 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
NELFE-214ENST00000625905 FGRP09769 529 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 FCGRTP55899 365 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 PKN2Q16513 984 aaKnown RBP10.9□□□□□ -0.66
NELFE-214ENST00000625905 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 OTOP1Q7RTM1 612 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 ESR2Q92731 530 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 ESYT1Q9BSJ8 1104 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 INCENPQ9NQS7 918 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 TACC3Q9Y6A5 838 aa10.9□□□□□ -0.66
NELFE-214ENST00000625905 FLOT1O75955 427 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
NELFE-214ENST00000625905 NDUFB10O96000 172 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 NT5C2P49902 561 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 PTH1RQ03431 593 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
NELFE-214ENST00000625905 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 ANO2Q9NQ90 1003 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 MORF4L1Q9UBU8 362 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 MGAMO43451 1857 aa10.89□□□□□ -0.67
NELFE-214ENST00000625905 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 TNPO2O14787 897 aaKnown RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 NMT2O60551 498 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 GNRH1P01148 92 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 PSMC4P43686 418 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 CAP1Q01518 475 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 GPRC5AQ8NFJ5 357 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 KRT23Q9C075 422 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 CNNM2Q9H8M5 875 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 IL17RBQ9NRM6 502 aa10.88□□□□□ -0.67
NELFE-214ENST00000625905 ISY1Q9ULR0 285 aaKnown RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 RBM8AQ9Y5S9 174 aaKnown RBP10.88□□□□□ -0.67
NELFE-214ENST00000625905 MYPNQ86TC9 1320 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 B4E1Z4 1266 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 F5H6K3 240 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 KDM4AO75164 1064 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 HOXD10P28358 340 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 CTGFP29279 349 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 ERVK-24P63145 666 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 KLRC3Q07444 240 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 TRDNQ13061 729 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 COG2Q14746 738 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 SLFN13Q68D06 897 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
NELFE-214ENST00000625905 MKL1Q969V6 931 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 ABHD8Q96I13 439 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 NUP88Q99567 741 aaPredicted RBP10.87□□□□□ -0.67
NELFE-214ENST00000625905 LSG1Q9H089 658 aaKnown RBP10.87□□□□□ -0.67
NELFE-214ENST00000625905 TXNRD2Q9NNW7 524 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 RABGAP1Q9Y3P9 1069 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 RLFQ13129 1914 aa10.87□□□□□ -0.67
NELFE-214ENST00000625905 PEX10O60683 326 aa10.86□□□□□ -0.67
NELFE-214ENST00000625905 CYP21A2P08686 494 aa10.86□□□□□ -0.67
NELFE-214ENST00000625905 TOP1P11387 765 aaKnown RBP10.86□□□□□ -0.67
NELFE-214ENST00000625905 PRMT2P55345 433 aa10.86□□□□□ -0.67
NELFE-214ENST00000625905 CCNA1P78396 465 aa10.86□□□□□ -0.67
NELFE-214ENST00000625905 RALYLQ86SE5 291 aaKnown RBP10.86□□□□□ -0.67
NELFE-214ENST00000625905 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms