RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 LCORLQ8N3X6 602 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 DYNLL2Q96FJ2 89 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 ZNFX1Q9P2E3 1918 aaKnown RBP13.43□□□□□ -0.26
DDX41-218ENST00000625286 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 NAV1Q8NEY1 1877 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
DDX41-218ENST00000625286 CNGA1P29973 690 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 COG2Q14746 738 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 PRAMEF19Q5SWL8 479 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
DDX41-218ENST00000625286 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 LPAR1Q92633 364 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 DCP1AQ9NPI6 582 aaPredicted RBP13.42□□□□□ -0.26
DDX41-218ENST00000625286 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 STXBP5LQ9Y2K9 1186 aa13.42□□□□□ -0.26
DDX41-218ENST00000625286 BAZ2AQ9UIF9 1905 aaKnown RBP13.41□□□□□ -0.26
DDX41-218ENST00000625286 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 GOLIM4O00461 696 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 GLRX3O76003 335 aaKnown RBP13.41□□□□□ -0.26
DDX41-218ENST00000625286 ERCC3P19447 782 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 ADORA2AP29274 412 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 GUCD1Q96NT3 240 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 SPATC1LQ9H0A9 340 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
DDX41-218ENST00000625286 A0A0G2JMZ2 1700 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
DDX41-218ENST00000625286 APBB1O00213 710 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 DNM1LO00429 736 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
DDX41-218ENST00000625286 AKR1B1P15121 316 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 DSG3P32926 999 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 RTP1P59025 263 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX41-218ENST00000625286 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 TMED8Q6PL24 325 aaPredicted RBP13.4□□□□□ -0.26
DDX41-218ENST00000625286 CRNKL1Q9BZJ0 848 aaKnown RBP13.4□□□□□ -0.26
DDX41-218ENST00000625286 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 LTBP2Q14767 1821 aa13.4□□□□□ -0.26
DDX41-218ENST00000625286 SPTBN5Q9NRC6 3674 aaKnown RBP13.4□□□□□ -0.26
DDX41-218ENST00000625286 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 SLC39A5Q6ZMH5 540 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 DPP9Q86TI2 863 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX41-218ENST00000625286 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
DDX41-218ENST00000625286 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
DDX41-218ENST00000625286 STRNO43815 780 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 MSCO60682 206 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
DDX41-218ENST00000625286 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 SH3RF1Q7Z6J0 888 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 MIER1Q8N108 512 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 FAM161BQ96MY7 647 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
DDX41-218ENST00000625286 COL11A1P12107 1806 aaPredicted RBP13.38□□□□□ -0.27
DDX41-218ENST00000625286 MYH8P13535 1937 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 SEPT4O43236 478 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 ITGB8P26012 769 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 ADD2P35612 726 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 SHHQ15465 462 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
DDX41-218ENST00000625286 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
DDX41-218ENST00000625286 MAML3Q96JK9 1138 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
DDX41-218ENST00000625286 FLOT1O75955 427 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 MBD4O95243 580 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 TAL1P17542 331 aaPredicted RBP13.36□□□□□ -0.27
DDX41-218ENST00000625286 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 CDK8P49336 464 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 PLS1Q14651 629 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 SNX17Q15036 470 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 LRRC41Q15345 812 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 CLASRPQ8N2M8 674 aaKnown RBP13.36□□□□□ -0.27
DDX41-218ENST00000625286 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDX41-218ENST00000625286 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
DDX41-218ENST00000625286 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 USP17L21D6R901 530 aa13.35□□□□□ -0.27
DDX41-218ENST00000625286 PGK2P07205 417 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms