RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SEC62Q99442 399 aaKnown RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 GREB1LQ9C091 1923 aaPredicted RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 SWAP70Q9UH65 585 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 MPHOSPH10O00566 681 aaKnown RBP23.8■■□□□ 1.4
R3HCC1-210ENST00000625275 FARP2O94887 1054 aaPredicted RBP23.8■■□□□ 1.4
R3HCC1-210ENST00000625275 POTEEQ6S8J3 1075 aa23.8■■□□□ 1.4
R3HCC1-210ENST00000625275 DEFB118Q96PH6 123 aa23.8■■□□□ 1.4
R3HCC1-210ENST00000625275 MYH4Q9Y623 1939 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 M0R2C6 588 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 CAPN2P17655 700 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 CWC27Q6UX04 472 aaKnown RBP23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 CATSPERGQ6ZRH7 1159 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 CCAR1Q8IX12 1150 aaKnown RBP23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 NUDT12Q9BQG2 462 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 PORCNQ9H237 461 aa23.79■■□□□ 1.4
R3HCC1-210ENST00000625275 ZNFX1Q9P2E3 1918 aaKnown RBP23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 Q3C1V9 767 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 TMEM179Q6ZVK1 233 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 AMOTL1Q8IY63 956 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 DYNLL2Q96FJ2 89 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 DDRGK1Q96HY6 314 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 HELLSQ9NRZ9 838 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 RABGAP1Q9Y3P9 1069 aa23.78■■□□□ 1.4
R3HCC1-210ENST00000625275 CDC45O75419 566 aa23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 CYP2B6P20813 491 aa23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 TRIB2Q92519 343 aa23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 HTATIP2Q9BUP3 242 aa23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 RPAP3Q9H6T3 665 aaPredicted RBP23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 ZNF236Q9UL36 1845 aa23.77■■□□□ 1.4
R3HCC1-210ENST00000625275 C12orf60Q5U649 245 aa23.76■■□□□ 1.39
R3HCC1-210ENST00000625275 LBX2Q6XYB7 198 aa23.76■■□□□ 1.39
R3HCC1-210ENST00000625275 GPR142Q7Z601 462 aa23.76■■□□□ 1.39
R3HCC1-210ENST00000625275 CRISPLD2Q9H0B8 497 aa23.76■■□□□ 1.39
R3HCC1-210ENST00000625275 SLC4A4Q9Y6R1 1079 aa23.76■■□□□ 1.39
R3HCC1-210ENST00000625275 CYP2D7A0A087X1C5 515 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 A0A1W2PRG0 241 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 USP17L12C9JPN9 530 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 USP17L21D6R901 530 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 GPAA1O43292 621 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 CNMDO75829 334 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 TFRCP02786 760 aaKnown RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 XRCC5P13010 732 aaKnown RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 CCNA1P78396 465 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 MCMDC2Q4G0Z9 681 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 CCDC129Q6ZRS4 1044 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 IL25Q9H293 177 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 RPTORQ8N122 1335 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 SPDYE16A6NNV3 312 aaPredicted RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 H0YGN5 161 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 AKR1B1P15121 316 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 TRIM32Q13049 653 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 PLEKHH3Q7Z736 793 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 ZNF589Q86UQ0 364 aaPredicted RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 DPF3Q92784 378 aa23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 STRBPQ96SI9 672 aaKnown RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 CWC22Q9HCG8 908 aaKnown RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 HMX1Q9NP08 348 aaPredicted RBP23.75■■□□□ 1.39
R3HCC1-210ENST00000625275 RGS2P41220 211 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 CDK8P49336 464 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 HABP4Q5JVS0 413 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 MORN1Q5T089 497 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 C16orf86Q6ZW13 317 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 TRMT44Q8IYL2 757 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 USP6NLQ92738 828 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 CCDC17Q96LX7 622 aa23.74■■□□□ 1.39
R3HCC1-210ENST00000625275 SMIM22K7EJ46 135 aa23.73■■□□□ 1.39
R3HCC1-210ENST00000625275 CLEC10AQ8IUN9 316 aa23.73■■□□□ 1.39
R3HCC1-210ENST00000625275 APBA2Q99767 749 aa23.73■■□□□ 1.39
R3HCC1-210ENST00000625275 ARHGEF10LQ9HCE6 1279 aa23.73■■□□□ 1.39
R3HCC1-210ENST00000625275 RAD50Q92878 1312 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 ZKSCAN1P17029 563 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 ICA1Q05084 483 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 CASC1Q6TDU7 716 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 RUFY2Q8WXA3 655 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 TANGO6Q9C0B7 1094 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 SH2D4AQ9H788 454 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 BTBD7Q9P203 1132 aa23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 ARPP21Q9UBL0 812 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-210ENST00000625275 CCDC171Q6TFL3 1326 aa23.71■■□□□ 1.39
R3HCC1-210ENST00000625275 PLXNA1Q9UIW2 1896 aa23.71■■□□□ 1.39
R3HCC1-210ENST00000625275 PRKAR2AP13861 404 aaKnown RBP23.71■■□□□ 1.39
R3HCC1-210ENST00000625275 CTR9Q6PD62 1173 aa23.71■■□□□ 1.39
R3HCC1-210ENST00000625275 LPAR1Q92633 364 aa23.71■■□□□ 1.39
R3HCC1-210ENST00000625275 SGSM2O43147 1006 aa23.7■■□□□ 1.38
R3HCC1-210ENST00000625275 WDR78Q5VTH9 848 aa23.7■■□□□ 1.38
R3HCC1-210ENST00000625275 ESYT1Q9BSJ8 1104 aa23.7■■□□□ 1.38
R3HCC1-210ENST00000625275 TMX2Q9Y320 296 aa23.7■■□□□ 1.38
R3HCC1-210ENST00000625275 MAP2K5Q13163 448 aa23.69■■□□□ 1.38
R3HCC1-210ENST00000625275 COG2Q14746 738 aa23.69■■□□□ 1.38
R3HCC1-210ENST00000625275 KIAA1755Q5JYT7 1200 aa23.69■■□□□ 1.38
R3HCC1-210ENST00000625275 SIAH1Q8IUQ4 282 aa23.69■■□□□ 1.38
R3HCC1-210ENST00000625275 ANKLE1Q8NAG6 615 aa23.69■■□□□ 1.38
R3HCC1-210ENST00000625275 FOXP2O15409 715 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 GNAT2P19087 354 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 CCL14Q16627 93 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 VPS53Q5VIR6 699 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 VCPKMTQ9H867 229 aa23.68■■□□□ 1.38
R3HCC1-210ENST00000625275 HOXC10Q9NYD6 342 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms