RNA–Protein interactions for RNA: ENST00000625096.3

CU633904.1-202, humanhuman

TSL 2 BASIC

Gene CU633904.1, Length 2,247 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633904.1-202ENST00000625096 TBC1D12O60347 775 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 USP2O75604 605 aaPredicted RBP11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 ZSCAN31Q96LW9 406 aaPredicted RBP11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 PTPDC1A2A3K4 754 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 NTRK3Q16288 839 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 RTN1Q16799 776 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 DGKHQ86XP1 1220 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
CU633904.1-202ENST00000625096 TTLL1O95922 423 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 DDIT3P35638 169 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 NOVP48745 357 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 KCTD1Q719H9 257 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 CATIPQ7Z7H3 387 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 KLRG1Q96E93 195 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 CCDC17Q96LX7 622 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 MAD2L2Q9UI95 211 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 PARP14Q460N5 1801 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 TAL1P17542 331 aaPredicted RBP11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 SLC16A2P36021 539 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 ANKS1AQ92625 1134 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 CABP5Q9NP86 173 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
CU633904.1-202ENST00000625096 COL11A1P12107 1806 aaPredicted RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 PDHBP11177 359 aa11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 SNAP25P60880 206 aa11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 TTLL12Q14166 644 aaPredicted RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 SHISA4Q96DD7 197 aa11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 SLC26A6Q9BXS9 759 aa11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.65
CU633904.1-202ENST00000625096 CYTH3O43739 400 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 VGLL4Q14135 290 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 SYNE3Q6ZMZ3 975 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 KANSL2Q9H9L4 492 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 ZDHHC9Q9Y397 364 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 CPLX1O14810 134 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 FUT2Q10981 343 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 TMTC2Q8N394 836 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 VAT1LQ9HCJ6 419 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
CU633904.1-202ENST00000625096 CENPFP49454 3210 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 RLFQ13129 1914 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 TRIM75PA6NK02 468 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 F5H6K3 240 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 ADAMTS3O15072 1205 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 DDAH1O94760 285 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 NDUFB10O96000 172 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 KLRC3Q07444 240 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 GRM4Q14833 912 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 DCAF15Q66K64 600 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 TMTC3Q6ZXV5 915 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
CU633904.1-202ENST00000625096 ELP3Q9H9T3 547 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 NYAP2Q9P242 653 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
CU633904.1-202ENST00000625096 SNCAIPQ9Y6H5 919 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 CTNND1O60716 968 aaKnown RBP11□□□□□ -0.65
CU633904.1-202ENST00000625096 PTPRAP18433 802 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
CU633904.1-202ENST00000625096 CCDC96Q2M329 555 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 SLFN13Q68D06 897 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 SCYL3Q8IZE3 742 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
CU633904.1-202ENST00000625096 ZHX2Q9Y6X8 837 aa11□□□□□ -0.65
CU633904.1-202ENST00000625096 NID2Q14112 1375 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 ASNSP08243 561 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 SYT1P21579 422 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 SPP2Q13103 211 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 MTMR2Q13614 643 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 FERMT3Q86UX7 667 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
CU633904.1-202ENST00000625096 GPBP1L1Q9HC44 474 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms