RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 SIAH1Q8IUQ4 282 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 CCAR1Q8IX12 1150 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 ANAPC4Q9UJX5 808 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 RAD50Q92878 1312 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 CHMLP26374 656 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 CTGFP29279 349 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 PRMT2P55345 433 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 NYAP2Q9P242 653 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
PCDHGC3-208ENST00000622836 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 ZNF213O14771 459 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 WDR46O15213 610 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 TTLL1O95922 423 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 COA7Q96BR5 231 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 MTMR4Q9NYA4 1195 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 SRRDQ9UH36 339 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 PTCH2Q9Y6C5 1203 aa16.55■□□□□ 0.24
PCDHGC3-208ENST00000622836 FLOT1O75955 427 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 COG2Q14746 738 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 KIAA1755Q5JYT7 1200 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 MORF4L1Q9UBU8 362 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
PCDHGC3-208ENST00000622836 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 ORC4O43929 436 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 PEX10O60683 326 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 ERVK-24P63145 666 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 CCNA1P78396 465 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 PRKCZQ05513 592 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 AKNAD1Q5T1N1 836 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 IL25Q9H293 177 aa16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-208ENST00000622836 F5H6K3 240 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 KLRC3Q07444 240 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 STAG1Q8WVM7 1258 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 TACC3Q9Y6A5 838 aa16.52■□□□□ 0.24
PCDHGC3-208ENST00000622836 MGAMO43451 1857 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 NMT2O60551 498 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 NDUFB10O96000 172 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 Q3C1V9 767 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 KIAA1211Q6ZU35 1233 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 NUP88Q99567 741 aaPredicted RBP16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
PCDHGC3-208ENST00000622836 SGSM2O43147 1006 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 FGRP09769 529 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 MAPK4P31152 587 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 DSG3P32926 999 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 FLT3LGP49771 235 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 SOX10P56693 466 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 PLS1Q14651 629 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 ESR2Q92731 530 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 MKL1Q969V6 931 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 GABRQQ9UN88 632 aa16.5■□□□□ 0.23
PCDHGC3-208ENST00000622836 NEDD4P46934 1319 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms