RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 LRIT3Q3SXY7 679 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 GPR153Q6NV75 609 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 TMEM179Q6ZVK1 233 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 TDHQ8IZJ6 230 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 MOV10L1Q9BXT6 1211 aaKnown RBP28.74■■■□□ 2.19
CPSF1-214ENST00000622776 TANGO6Q9C0B7 1094 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 ZBTB40Q9NUA8 1239 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 DDX19BQ9UMR2 479 aa28.74■■■□□ 2.19
CPSF1-214ENST00000622776 MSCO60682 206 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 RAB11FIP3O75154 756 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 CNGA1P29973 690 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 DYNLL2Q96FJ2 89 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 PAG1Q9NWQ8 432 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 COG6Q9Y2V7 657 aa28.73■■■□□ 2.19
CPSF1-214ENST00000622776 PRKAB2O43741 272 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 IGHA2P01877 340 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 KIAA1755Q5JYT7 1200 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 DPP9Q86TI2 863 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 SENP6Q9GZR1 1112 aaPredicted RBP28.72■■■□□ 2.19
CPSF1-214ENST00000622776 SPATC1LQ9H0A9 340 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 BOLA2Q9H3K6 86 aa28.72■■■□□ 2.19
CPSF1-214ENST00000622776 STRNO43815 780 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 MBD4O95243 580 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 ADORA2AP29274 412 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 ADD2P35612 726 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 SLFNL1Q499Z3 407 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 SHCBP1Q8NEM2 672 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 TRPV1Q8NER1 839 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 LPAR1Q92633 364 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 ATP8A2Q9NTI2 1148 aa28.71■■■□□ 2.19
CPSF1-214ENST00000622776 COL6A3P12111 3177 aa28.7■■■□□ 2.19
CPSF1-214ENST00000622776 SIAH1Q8IUQ4 282 aa28.7■■■□□ 2.18
CPSF1-214ENST00000622776 SLC17A8Q8NDX2 589 aa28.7■■■□□ 2.18
CPSF1-214ENST00000622776 FRMPD3Q5JV73 1810 aa28.7■■■□□ 2.18
CPSF1-214ENST00000622776 CUL9Q8IWT3 2517 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 CYBAP13498 195 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 AKR1B1P15121 316 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 ATP5JP18859 108 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 ERCC3P19447 782 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 DSG3P32926 999 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 OLFML2BQ68BL8 750 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 DIEXFQ68CQ4 756 aaKnown RBP28.69■■■□□ 2.18
CPSF1-214ENST00000622776 CLEC10AQ8IUN9 316 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 MB21D1Q8N884 522 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 ARHGEF10LQ9HCE6 1279 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 TMX2Q9Y320 296 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 RLFQ13129 1914 aa28.69■■■□□ 2.18
CPSF1-214ENST00000622776 MDM2Q00987 491 aaPredicted RBP28.68■■■□□ 2.18
CPSF1-214ENST00000622776 ICA1Q05084 483 aa28.68■■■□□ 2.18
CPSF1-214ENST00000622776 DEFB123Q8N688 67 aa28.68■■■□□ 2.18
CPSF1-214ENST00000622776 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.68■■■□□ 2.187e-14■■■■□ 22.4
CPSF1-214ENST00000622776 DNAH12Q6ZR08 3092 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 DNM1LO00429 736 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 FLOT1O75955 427 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 SPICE1Q8N0Z3 855 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 CCDC17Q96LX7 622 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 HAUS7Q99871 368 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 SH2D4AQ9H788 454 aa28.67■■■□□ 2.18
CPSF1-214ENST00000622776 CYP2D7A0A087X1C5 515 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 SMIM22K7EJ46 135 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 COBLO75128 1261 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 CDK8P49336 464 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 PLS1Q14651 629 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 C12orf60Q5U649 245 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 ATG4CQ96DT6 458 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 VCPKMTQ9H867 229 aa28.66■■■□□ 2.18
CPSF1-214ENST00000622776 BAZ2AQ9UIF9 1905 aaKnown RBP28.66■■■□□ 2.18
CPSF1-214ENST00000622776 A0A0C4DFX4 3053 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 ZNF236Q9UL36 1845 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 USP17L12C9JPN9 530 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 USP17L21D6R901 530 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 ATN1P54259 1190 aaPredicted RBP28.65■■■□□ 2.18
CPSF1-214ENST00000622776 UBE3CQ15386 1083 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 Q7L0L9 218 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 CHMP4BQ9H444 224 aaKnown RBP28.65■■■□□ 2.18
CPSF1-214ENST00000622776 MROH8Q9H579 483 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 MYH8P13535 1937 aa28.65■■■□□ 2.18
CPSF1-214ENST00000622776 A0A0G2JMZ2 1700 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 CHGBP05060 677 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 NCAPG2Q86XI2 1143 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 AMOTL1Q8IY63 956 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 ARRDC4Q8NCT1 418 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 SLC5A4Q9NY91 659 aa28.64■■■□□ 2.18
CPSF1-214ENST00000622776 WDR46O15213 610 aaKnown RBP28.63■■■□□ 2.17
CPSF1-214ENST00000622776 GJC2Q5T442 439 aaPredicted RBP28.63■■■□□ 2.17
CPSF1-214ENST00000622776 C16orf86Q6ZW13 317 aa28.63■■■□□ 2.17
CPSF1-214ENST00000622776 ABRAQ8N0Z2 381 aa28.63■■■□□ 2.17
CPSF1-214ENST00000622776 SAMD1Q6SPF0 538 aaPredicted RBP28.62■■■□□ 2.17
CPSF1-214ENST00000622776 DDRGK1Q96HY6 314 aa28.62■■■□□ 2.17
CPSF1-214ENST00000622776 LBHD1Q9BQE6 289 aaPredicted RBP28.62■■■□□ 2.17
CPSF1-214ENST00000622776 SEPT4O43236 478 aa28.61■■■□□ 2.17
CPSF1-214ENST00000622776 RTP1P59025 263 aa28.61■■■□□ 2.17
CPSF1-214ENST00000622776 ANO1Q5XXA6 986 aa28.61■■■□□ 2.17
CPSF1-214ENST00000622776 SLC4A4Q9Y6R1 1079 aa28.61■■■□□ 2.17
CPSF1-214ENST00000622776 EEF2P13639 858 aaKnown RBP28.6■■■□□ 2.17
CPSF1-214ENST00000622776 TMEM132BQ14DG7 1078 aa28.6■■■□□ 2.17
CPSF1-214ENST00000622776 PRAMEF19Q5SWL8 479 aa28.6■■■□□ 2.17
CPSF1-214ENST00000622776 KANSL2Q9H9L4 492 aa28.6■■■□□ 2.17
CPSF1-214ENST00000622776 MTMR10Q9NXD2 777 aa28.6■■■□□ 2.17
CPSF1-214ENST00000622776 FCER1AP12319 257 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms