RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 GRAPLQ8TC17 118 aaPredicted RBP13.65□□□□□ -0.22
TP53-227ENST00000622645 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
TP53-227ENST00000622645 STAMQ92783 540 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 PAGE5Q96GU1 130 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 KAT14Q9H8E8 782 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 ZNF18P17022 549 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 MTMR7Q9Y216 660 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 BTAF1O14981 1849 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 NRDCO43847 1150 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 MCM7P33993 719 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
TP53-227ENST00000622645 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 GPKOWQ92917 476 aaPredicted RBP eCLIP13.64□□□□□ -0.23
TP53-227ENST00000622645 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 COL24A1Q17RW2 1714 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 PSDA5PKW4 1024 aaPredicted RBP13.64□□□□□ -0.23
TP53-227ENST00000622645 MYO1BO43795 1136 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 BMP15O95972 392 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
TP53-227ENST00000622645 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
TP53-227ENST00000622645 MORC2Q9Y6X9 1032 aaPredicted RBP13.64□□□□□ -0.23
TP53-227ENST00000622645 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 KIF5BP33176 963 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 PLCD1P51178 756 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 STX17P56962 302 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 DHX8Q14562 1220 aaKnown RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 IL17AQ16552 155 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 ZNF215Q9UL58 517 aaPredicted RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 SYT10Q6XYQ8 523 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 RASGRP4Q8TDF6 673 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
TP53-227ENST00000622645 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
TP53-227ENST00000622645 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
TP53-227ENST00000622645 KCNJ6P48051 423 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 XDHP47989 1333 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 BAG3O95817 575 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 CDC25AP30304 524 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 GPSM2P81274 684 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 DPYDQ12882 1025 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 PRR5LQ6MZQ0 368 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 STX8Q9UNK0 236 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 DLEC1Q9Y238 1755 aa13.62□□□□□ -0.23
TP53-227ENST00000622645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 TMED8Q6PL24 325 aaPredicted RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 ZNF804AQ7Z570 1209 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 COBLO75128 1261 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 TBX2Q13207 712 aaPredicted RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 TMEM139Q8IV31 216 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 BLIDQ8IZY5 108 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
TP53-227ENST00000622645 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
TP53-227ENST00000622645 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 E2F4Q16254 413 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 RASGRP2Q7LDG7 609 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
TP53-227ENST00000622645 GSDMAQ96QA5 445 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 MTRQ99707 1265 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 EP400Q96L91 3159 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 LAMB1P07942 1786 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 CYTH3O43739 400 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 UFL1O94874 794 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
TP53-227ENST00000622645 PPP4CP60510 307 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms