RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 MAN1B1Q9UKM7 699 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 PLCG2P16885 1265 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 UBE4AQ14139 1066 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
MSH6-215ENST00000622629 PALLDQ8WX93 1383 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 ERVV-1B6SEH8 477 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 COL9A3Q14050 684 aaPredicted RBP14.44□□□□□ -0.1
MSH6-215ENST00000622629 DYMQ7RTS9 669 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 BLIDQ8IZY5 108 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 TACC1O75410 805 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 FDPSP14324 419 aaKnown RBP14.44□□□□□ -0.1
MSH6-215ENST00000622629 CASP1P29466 404 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 IQCB1Q15051 598 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 ERFEQ4G0M1 354 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 TMTC1Q8IUR5 882 aa14.44□□□□□ -0.1
MSH6-215ENST00000622629 NAPGQ99747 312 aaPredicted RBP14.44□□□□□ -0.1
MSH6-215ENST00000622629 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
MSH6-215ENST00000622629 SPATA1Q5VX52 437 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 CYP26C1Q6V0L0 522 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 PXDNQ92626 1479 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 VPS18Q9P253 973 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 SV2BQ7L1I2 683 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 VPS36Q86VN1 386 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 TRIML1Q8N9V2 468 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 CUL5Q93034 780 aa14.43□□□□□ -0.1
MSH6-215ENST00000622629 TTF2Q9UNY4 1162 aaKnown RBP14.43□□□□□ -0.1
MSH6-215ENST00000622629 CKAP4Q07065 602 aaKnown RBP14.43□□□□□ -0.1
MSH6-215ENST00000622629 NONOQ15233 471 aaKnown RBP eCLIP14.43□□□□□ -0.1
MSH6-215ENST00000622629 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 LY9Q9HBG7 655 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
MSH6-215ENST00000622629 AP5Z1O43299 807 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
MSH6-215ENST00000622629 DHX40Q8IX18 779 aaKnown RBP14.42□□□□□ -0.1
MSH6-215ENST00000622629 TRPC5Q9UL62 973 aaPredicted RBP14.42□□□□□ -0.1
MSH6-215ENST00000622629 TRAF5O00463 557 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 PLEKHA8P1O95397 391 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 OXER1Q8TDS5 423 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 MYO6Q9UM54 1294 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 FOXN1O15353 648 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 NCBP1Q09161 790 aaKnown RBP14.42□□□□□ -0.1
MSH6-215ENST00000622629 SENP2Q9HC62 589 aa14.42□□□□□ -0.1
MSH6-215ENST00000622629 AFF2P51816 1311 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 STX10O60499 249 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 ERLIN2O94905 339 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 MORC3Q14149 939 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 CABP7Q86V35 215 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 PSMB7Q99436 277 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 UBN2Q6ZU65 1347 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 KCNJ18B7U540 433 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 CAPN2P17655 700 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 CASP14P31944 242 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 ANTXR2P58335 489 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 RAD51AP2Q09MP3 1159 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 KCNJ12Q14500 433 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 SHC4Q6S5L8 630 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 NEK11Q8NG66 645 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 LRWD1Q9UFC0 647 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 UBR1Q8IWV7 1749 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 GSG1L2A8MUP6 293 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 GUCY1A2P33402 732 aa14.41□□□□□ -0.1
MSH6-215ENST00000622629 PRPF4BQ13523 1007 aaKnown RBP14.41□□□□□ -0.1
MSH6-215ENST00000622629 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 USP8P40818 1118 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 EYA3Q99504 573 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
MSH6-215ENST00000622629 SLFN14P0C7P3 912 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 PTPREP23469 700 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 VSTM4Q8IW00 320 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
MSH6-215ENST00000622629 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 SRPRBQ9Y5M8 271 aaKnown RBP14.4□□□□□ -0.1
MSH6-215ENST00000622629 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
MSH6-215ENST00000622629 KIAA0754O94854 1291 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 TRIM14Q14142 442 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 MST1RQ04912 1400 aa14.4□□□□□ -0.1
MSH6-215ENST00000622629 GSDMAQ96QA5 445 aa14.4□□□□□ -0.11
MSH6-215ENST00000622629 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 USP17L8P0C7I0 530 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 TECP42680 631 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
MSH6-215ENST00000622629 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
MSH6-215ENST00000622629 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 FAM207AQ9NSI2 230 aaPredicted RBP14.39□□□□□ -0.11
MSH6-215ENST00000622629 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 ERCC5P28715 1186 aaPredicted RBP14.39□□□□□ -0.11
MSH6-215ENST00000622629 MFSD14BQ5SR56 506 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
MSH6-215ENST00000622629 DDAH1O94760 285 aa14.39□□□□□ -0.11
MSH6-215ENST00000622629 CDHR2Q9BYE9 1310 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms