RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 DTNBO60941 627 aa20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 ADD1P35611 737 aaKnown RBP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 MKL1Q969V6 931 aa20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 LLPHQ9BRT6 129 aaKnown RBP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 GPBP1L1Q9HC44 474 aaPredicted RBP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 PICK1Q9NRD5 415 aa20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 FAM217BQ9NTX9 383 aaPredicted RBP20.77■□□□□ 0.92
PTCHD3-202ENST00000622555 PAPPA2Q9BXP8 1791 aa20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 IREB2P48200 963 aaKnown RBP20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 PPP2R5BQ15173 497 aa20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 CPLX2Q6PUV4 134 aaKnown RBP20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 CCDC84Q86UT8 332 aaPredicted RBP20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
PTCHD3-202ENST00000622555 RAD21O60216 631 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 CTDNEP1O95476 244 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 KIF5BP33176 963 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 GRM4Q14833 912 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 NSUN7Q8NE18 718 aaKnown RBP20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 MAP3K14Q99558 947 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 JAK2O60674 1132 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 NOL9Q5SY16 702 aaKnown RBP20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 ACER1Q8TDN7 264 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 ZNF408Q9H9D4 720 aa20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 CWC22Q9HCG8 908 aaKnown RBP20.75■□□□□ 0.91
PTCHD3-202ENST00000622555 MYH6P13533 1939 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 A0A1W2PRG0 241 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 USP17L5A8MUK1 530 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 PPFIA3O75145 1194 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 CDKL5O76039 1030 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 GJB2P29033 226 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 ECE1P42892 770 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 FMR1Q06787 632 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 CHADLQ6NUI6 762 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 SYNPO2Q9UMS6 1093 aa20.74■□□□□ 0.91
PTCHD3-202ENST00000622555 PARP1P09874 1014 aaKnown RBP20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 PDHBP11177 359 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 ARMC9Q7Z3E5 817 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 PHIPQ8WWQ0 1821 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 SH2D4AQ9H788 454 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 TMX2Q9Y320 296 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 CSADQ9Y600 493 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 PLEKHA8P1O95397 391 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 PTPRAP18433 802 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 VGLL4Q14135 290 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 NTRK3Q16288 839 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 SLFN13Q68D06 897 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 USP17L2Q6R6M4 530 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 MOB2Q70IA6 237 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 CMTR1Q8N1G2 835 aaKnown RBP20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 SMARCC2Q8TAQ2 1214 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 FEZ1Q99689 392 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 MAD2L2Q9UI95 211 aa20.73■□□□□ 0.91
PTCHD3-202ENST00000622555 BAZ2BQ9UIF8 2168 aaKnown RBP20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 GOLGA8HP0CJ92 632 aa20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 HMGN5P82970 282 aaKnown RBP20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 STAG2Q8N3U4 1231 aa20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 CCDC82Q8N4S0 544 aa20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 GOPCQ9HD26 462 aa20.72■□□□□ 0.91
PTCHD3-202ENST00000622555 TRPM7Q96QT4 1865 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 FRMPD2Q68DX3 1309 aaPredicted RBP20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 PALM3A6NDB9 673 aaPredicted RBP20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 F5H6K3 240 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 SNHG28P0DPA3 235 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 IFNAR1P17181 557 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 GNAQP50148 359 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 KLRC3Q07444 240 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 ZYXQ15942 572 aaKnown RBP20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 CCDC96Q2M329 555 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 DCAF4Q8WV16 495 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 PHKBQ93100 1093 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 AS3MTQ9HBK9 375 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 SNCAIPQ9Y6H5 919 aa20.71■□□□□ 0.91
PTCHD3-202ENST00000622555 NDUFB10O96000 172 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 SLC1A4P43007 532 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 ASPRV1Q53RT3 343 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 ANKRD13AQ8IZ07 590 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 SSRP1Q08945 709 aaKnown RBP20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 ZNF543Q08ER8 600 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 FAM184AQ8NB25 1140 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 WDR18Q9BV38 432 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 SLC26A6Q9BXS9 759 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 GPCPD1Q9NPB8 672 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 ZHX2Q9Y6X8 837 aa20.7■□□□□ 0.9
PTCHD3-202ENST00000622555 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
PTCHD3-202ENST00000622555 UBE2Q2LH0YL09 131 aa20.69■□□□□ 0.9
PTCHD3-202ENST00000622555 CELF2O95319 508 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms