RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 PHKBQ93100 1093 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 RBM27Q9P2N5 1060 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
CLTCL1-212ENST00000622493 WDR90Q96KV7 1748 aa16.52■□□□□ 0.23
CLTCL1-212ENST00000622493 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 H3BQV1 296 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 PRPF3O43395 683 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 ASNSP08243 561 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 PARP1P09874 1014 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 EEF2P13639 858 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 FUT2Q10981 343 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 SULF1Q8IWU6 871 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
CLTCL1-212ENST00000622493 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 F13A1P00488 732 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 PDHBP11177 359 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 GBP4Q96PP9 640 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 ARHGEF10LQ9HCE6 1279 aa16.5■□□□□ 0.23
CLTCL1-212ENST00000622493 POLR2AP24928 1970 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 JAG1P78504 1218 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 CMTR1Q8N1G2 835 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 ZNF112Q9UJU3 913 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
CLTCL1-212ENST00000622493 KLRF2D3W0D1 207 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 STAG2Q8N3U4 1231 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 SPZ1Q9BXG8 430 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 POTECB2RU33 542 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 XBP1P17861 261 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 TRIM29Q14134 588 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 MTMR7Q9Y216 660 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 V9GY48 417 aaPredicted RBP16.48■□□□□ 0.23
CLTCL1-212ENST00000622493 MYH6P13533 1939 aa16.47■□□□□ 0.23
CLTCL1-212ENST00000622493 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
CLTCL1-212ENST00000622493 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
CLTCL1-212ENST00000622493 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
CLTCL1-212ENST00000622493 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
CLTCL1-212ENST00000622493 F5H6K3 240 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 KLRC3Q07444 240 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 NFKBIBQ15653 356 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 PKN1Q16512 942 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 ATAD5Q96QE3 1844 aa16.46■□□□□ 0.23
CLTCL1-212ENST00000622493 BAG4O95429 457 aaKnown RBP16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 SLC1A4P43007 532 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 SCG2P13521 617 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 KRT40Q6A162 431 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
CLTCL1-212ENST00000622493 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
CLTCL1-212ENST00000622493 GOLGA6L22H0YM25 854 aa16.44■□□□□ 0.22
CLTCL1-212ENST00000622493 CYTH3O43739 400 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms