RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 APLFQ8IW19 511 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 FSIP1Q8NA03 581 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 TRIM58Q8NG06 486 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 DCAF5Q96JK2 942 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 RHOXF2Q9BQY4 288 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 CENPHQ9H3R5 247 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 HELLSQ9NRZ9 838 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 TPX2Q9ULW0 747 aaKnown RBP8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 TRPC6Q9Y210 931 aa8.42□□□□□ -1.06
TRIM49B-202ENST00000622138 PARP4Q9UKK3 1724 aaKnown RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC175P0C221 793 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 EPB41P11171 864 aaKnown RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 ADORA1P30542 326 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 NLRP12P59046 1061 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 SKIDA1Q1XH10 827 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 HHATQ5VTY9 493 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 TSHZ1Q6ZSZ6 1077 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 FAM228AQ86W67 206 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 FUKQ8N0W3 1084 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 ZFAND2BQ8WV99 257 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 OSBP2Q969R2 916 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 PLEKHG4BQ96PX9 1271 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 ALS2CR12Q96Q35 445 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 GJB4Q9NTQ9 266 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 RGL1Q9NZL6 768 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 DDX60Q8IY21 1712 aaKnown RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 OPA1O60313 960 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 ZNF202O95125 648 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 PDHBP11177 359 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 GGCXP38435 758 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CABP4P57796 275 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 HAND2P61296 217 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 TBX2Q13207 712 aaPredicted RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 BZW1Q7L1Q6 419 aaKnown RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CCDC170Q8IYT3 715 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 CCHCR1Q8TD31 782 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 RUBCNQ92622 972 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 SPAG5Q96R06 1193 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 KCPQ6ZWJ8 1503 aa8.41□□□□□ -1.06
TRIM49B-202ENST00000622138 UBR2Q8IWV8 1755 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 GOLGA6BA6NDN3 693 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 EYA2O00167 538 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 RNF113AO15541 343 aaKnown RBP8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 A1BGP04217 495 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 PYGLP06737 847 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 ME1P48163 572 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 USP14P54578 494 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 UBASH3AP57075 661 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 SNX1Q13596 522 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 SCARF1Q14162 830 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 DPCR1Q3MIW9 517 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 CRELD2Q6UXH1 353 aaPredicted RBP8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 RASSF8Q8NHQ8 419 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 B4GALNT2Q8NHY0 566 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 P3H4Q92791 437 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 DTNBP1Q96EV8 351 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 KIAA1468Q9P260 1216 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 MYO1AQ9UBC5 1043 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 BLOC1S6Q9UL45 172 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 PCDHA7Q9UN72 937 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 CLIC4Q9Y696 253 aa8.4□□□□□ -1.06
TRIM49B-202ENST00000622138 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 AGPSO00116 658 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 BIN1O00499 593 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ZSCAN9O15535 394 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 IFIT1P09914 478 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 TOGARAM2Q6ZUX3 1019 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 FMR1NBQ8N0W7 255 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ACSBG1Q96GR2 724 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 RPGRIP1Q96KN7 1286 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 NAPGQ99747 312 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 NAA15Q9BXJ9 866 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 GPR108Q9NPR9 543 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 CWC25Q9NXE8 425 aaPredicted RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 HOOK1Q9UJC3 728 aaKnown RBP8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 TMEM94Q12767 1356 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 SPEF2Q9C093 1822 aa8.39□□□□□ -1.07
TRIM49B-202ENST00000622138 MGRN1O60291 552 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms