RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 SWAP70Q9UH65 585 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 PFASO15067 1338 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 MBD4O95243 580 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 CHGBP05060 677 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 AKR1B1P15121 316 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 ATP5JP18859 108 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 MAGEA10P43363 369 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-227ENST00000622057 GRB14Q14449 540 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 PLS1Q14651 629 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 TMEM179Q6ZVK1 233 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 AMOTL1Q8IY63 956 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 SPICE1Q8N0Z3 855 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
TARDBP-227ENST00000622057 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.612e-12■□□□□ 8.7
TARDBP-227ENST00000622057 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 ATP8A2Q9NTI2 1148 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 DDX20Q9UHI6 824 aaKnown RBP11.24□□□□□ -0.61
TARDBP-227ENST00000622057 MYH1P12882 1939 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 SZT2Q5T011 3432 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 CEP290O15078 2479 aa11.24□□□□□ -0.61
TARDBP-227ENST00000622057 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 CDK5RAP2Q96SN8 1893 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 USP17L21D6R901 530 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
TARDBP-227ENST00000622057 HOXC6P09630 235 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 COL6A1P12109 1028 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 ERCC3P19447 782 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 ADORA2AP29274 412 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 DSG3P32926 999 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 CDK8P49336 464 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 ICA1Q05084 483 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 SIAH1Q8IUQ4 282 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 HAUS7Q99871 368 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
TARDBP-227ENST00000622057 SPATC1LQ9H0A9 340 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 TMX2Q9Y320 296 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
TARDBP-227ENST00000622057 STRNO43815 780 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 RAD21O60216 631 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 FLOT1O75955 427 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-227ENST00000622057 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-227ENST00000622057 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-227ENST00000622057 C12orf60Q5U649 245 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 ANO1Q5XXA6 986 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 LPAR1Q92633 364 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 ATG4CQ96DT6 458 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
TARDBP-227ENST00000622057 MSCO60682 206 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 COBLO75128 1261 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.61
TARDBP-227ENST00000622057 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 C20orf194Q5TEA3 1177 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 TDHQ8IZJ6 230 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.61
TARDBP-227ENST00000622057 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
TARDBP-227ENST00000622057 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
TARDBP-227ENST00000622057 WDR46O15213 610 aaKnown RBP11.2□□□□□ -0.62
TARDBP-227ENST00000622057 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-227ENST00000622057 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 CTR9Q6PD62 1173 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 MB21D1Q8N884 522 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 SHCBP1Q8NEM2 672 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 MROH8Q9H579 483 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
TARDBP-227ENST00000622057 DDX60LQ5H9U9 1706 aaKnown RBP11.19□□□□□ -0.62
TARDBP-227ENST00000622057 MINDY4BA8MYZ0 360 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 DNM1LO00429 736 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 CYBAP13498 195 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 TMEM132BQ14DG7 1078 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 LRIT3Q3SXY7 679 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 ARRDC4Q8NCT1 418 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-227ENST00000622057 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
TARDBP-227ENST00000622057 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
TARDBP-227ENST00000622057 SEPT4O43236 478 aa11.18□□□□□ -0.62
TARDBP-227ENST00000622057 SLC25A27O95847 323 aa11.18□□□□□ -0.62
TARDBP-227ENST00000622057 FCER1AP12319 257 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms