RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PPP4CP60510 307 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 DPYDQ12882 1025 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 GRAPQ13588 217 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 WDR66Q8TBY9 1149 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 GRAPLQ8TC17 118 aaPredicted RBP10.76□□□□□ -0.69
PDPN-212ENST00000621990 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 C8orf37Q96NL8 207 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 ATP2B1P20020 1258 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 KIF5BP33176 963 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 E2F4Q16254 413 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 DZIP1Q86YF9 867 aaKnown RBP10.75□□□□□ -0.69
PDPN-212ENST00000621990 PDCL2Q8N4E4 241 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 PDILTQ8N807 584 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 GSDMAQ96QA5 445 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 IL17RBQ9NRM6 502 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 TSPY2A6NKD2 308 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 TOP1P11387 765 aaKnown RBP10.75□□□□□ -0.69
PDPN-212ENST00000621990 CUL4BQ13620 913 aa10.75□□□□□ -0.69
PDPN-212ENST00000621990 NOM1Q5C9Z4 860 aaKnown RBP10.75□□□□□ -0.69
PDPN-212ENST00000621990 APTXQ7Z2E3 356 aaKnown RBP10.75□□□□□ -0.69
PDPN-212ENST00000621990 M0R2N6 131 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 PIP4K2BP78356 416 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 PTGDRQ13258 359 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 CCDC93Q567U6 631 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 CCDC178Q5BJE1 867 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 FAM177A1Q8N128 213 aaPredicted RBP10.74□□□□□ -0.69
PDPN-212ENST00000621990 ZNF592Q92610 1267 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 DHX58Q96C10 678 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 PYM1Q9BRP8 204 aaKnown RBP10.74□□□□□ -0.69
PDPN-212ENST00000621990 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
PDPN-212ENST00000621990 MCM9Q9NXL9 1143 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 XDHP47989 1333 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 A0A1B0GTH6 734 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 LDHBP07195 334 aaKnown RBP10.74□□□□□ -0.69
PDPN-212ENST00000621990 USP17L8P0C7I0 530 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 CALML3P27482 149 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 GSTO1P78417 241 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 GRM4Q14833 912 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 NR1I3Q14994 352 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
PDPN-212ENST00000621990 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
PDPN-212ENST00000621990 PHLPP2Q6ZVD8 1323 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 ARHGAP6O43182 974 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 ZNF174Q15697 407 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 CDKAL1Q5VV42 579 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
PDPN-212ENST00000621990 ERO1AQ96HE7 468 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 VEGFAP15692 232 aaPredicted RBP10.73□□□□□ -0.69
PDPN-212ENST00000621990 NLRP5P59047 1200 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 TFAP4Q01664 338 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 NFIXQ14938 502 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 IL17AQ16552 155 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 CRY2Q49AN0 593 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 PPP4R3BQ5MIZ7 849 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 TRMT44Q8IYL2 757 aaKnown RBP10.73□□□□□ -0.69
PDPN-212ENST00000621990 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 DAGLBQ8NCG7 672 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
PDPN-212ENST00000621990 FOCADQ5VW36 1801 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 LTBP1Q14766 1721 aa10.73□□□□□ -0.69
PDPN-212ENST00000621990 BAZ2BQ9UIF8 2168 aaKnown RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 VWA3AA6NCI4 1184 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 STX10O60499 249 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 RFC4P35249 363 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 ETF1P62495 437 aaKnown RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 TRIM65Q6PJ69 517 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 PIK3AP1Q6ZUJ8 805 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 ZNF804AQ7Z570 1209 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 REXO1L1PQ8IX06 675 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 SAMSN1Q9NSI8 373 aaKnown RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 ANKIB1Q9P2G1 1089 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 CGNQ9P2M7 1197 aaKnown RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 PCDHA4Q9UN74 947 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 ADAMTS3O15072 1205 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 BAG3O95817 575 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 PBX1P40424 430 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 GNAQP50148 359 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 GALNT17Q6IS24 598 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 IQUBQ8NA54 791 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 RTFDC1Q9BY42 306 aaPredicted RBP10.72□□□□□ -0.69
PDPN-212ENST00000621990 LRRC37AA6NMS7 1700 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 SYNRGQ9UMZ2 1314 aa10.72□□□□□ -0.69
PDPN-212ENST00000621990 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms