RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 POTECB2RU33 542 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 STX6O43752 255 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
CPNE3-212ENST00000621783 PDCP20941 246 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 KIF5BP33176 963 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 FOSBP53539 338 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 FUT2Q10981 343 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 PRAMEF18Q5VWM3 479 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 LARP1BQ659C4 914 aaKnown RBP12.4□□□□□ -0.42
CPNE3-212ENST00000621783 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
CPNE3-212ENST00000621783 HOOK2Q96ED9 719 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 ZNF341Q9BYN7 854 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 NYAP2Q9P242 653 aa12.4□□□□□ -0.42
CPNE3-212ENST00000621783 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 VPS37CA5D8V6 355 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 SNHG28P0DPA3 235 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 PDHBP11177 359 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 FOXD4L5Q5VV16 416 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 STAG2Q8N3U4 1231 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 FOXD4L4Q8WXT5 416 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-212ENST00000621783 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 MTMR6Q9Y217 621 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
CPNE3-212ENST00000621783 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
CPNE3-212ENST00000621783 USP17L5A8MUK1 530 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 ASNSP08243 561 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
CPNE3-212ENST00000621783 ZSCAN22P10073 491 aaPredicted RBP12.38□□□□□ -0.43
CPNE3-212ENST00000621783 GNAQP50148 359 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 ASPRV1Q53RT3 343 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 SRBD1Q8N5C6 995 aaKnown RBP12.38□□□□□ -0.43
CPNE3-212ENST00000621783 MKL1Q969V6 931 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
CPNE3-212ENST00000621783 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 MYH6P13533 1939 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 CTNND1O60716 968 aaKnown RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 DEXIO95424 95 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 F13A1P00488 732 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 INPP5BP32019 993 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 DLK2Q6UY11 383 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 CCDC82Q8N4S0 544 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 GMCL1P1Q8NEA9 526 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 AIFM3Q96NN9 605 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 WRNIP1Q96S55 665 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 LZTS2Q9BRK4 669 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
CPNE3-212ENST00000621783 POLR2AP24928 1970 aaKnown RBP12.37□□□□□ -0.43
CPNE3-212ENST00000621783 A0A1W2PRG0 241 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 H3BQV1 296 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
CPNE3-212ENST00000621783 ECE1P42892 770 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
CPNE3-212ENST00000621783 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 CCDC96Q2M329 555 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 ACER1Q8TDN7 264 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 WASF1Q92558 559 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
CPNE3-212ENST00000621783 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-212ENST00000621783 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
CPNE3-212ENST00000621783 KLRF2D3W0D1 207 aa12.35□□□□□ -0.43
CPNE3-212ENST00000621783 CYTH3O43739 400 aa12.35□□□□□ -0.43
CPNE3-212ENST00000621783 RAD21O60216 631 aa12.35□□□□□ -0.43
CPNE3-212ENST00000621783 NDUFB10O96000 172 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms