RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CATSPERGQ6ZRH7 1159 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 OTOP2Q7RTS6 562 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ASCL5Q7RTU5 278 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 DGLUCYQ7Z3D6 616 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 METTL16Q86W50 562 aaKnown RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 FAM126BQ8IXS8 530 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MSL3Q8N5Y2 521 aaKnown RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 SLC43A3Q8NBI5 491 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ANKS1AQ92625 1134 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 C12orf42Q96LP6 360 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CNTNAP3BQ96NU0 1288 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 SLC9A7Q96T83 725 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 FSD1Q9BTV5 496 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 CNTNAP3Q9BZ76 1288 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 MROH8Q9H579 483 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 EMILIN3Q9NT22 766 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 DLL3Q9NYJ7 618 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 PI4KBQ9UBF8 816 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 KMT2BQ9UMN6 2715 aaPredicted RBP3□□□□□ -1.93
CPNE3-211ENST00000621526 COL4A1P02462 1669 aa3□□□□□ -1.93
CPNE3-211ENST00000621526 ANKRD11Q6UB99 2663 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF536O15090 1300 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 TNKSO95271 1327 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 CLSPNQ9HAW4 1339 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SALL1Q9NSC2 1324 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 GPR75-ASB3A0A0A6YYF3 556 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 A0A0U1RQG5 324 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 EPOPA6NHQ4 379 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SEMA3EO15041 775 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 GALR2O43603 387 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 PEX10O60683 326 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 COBLO75128 1261 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 DUSP11O75319 330 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 PGK1P00558 417 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 MYCNP04198 464 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 LDHBP07195 334 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 IFIT1P09914 478 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SUPT20HL2P0C7V6 817 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ZNF865P0CJ78 1059 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ACTN1P12814 892 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 AKR1A1P14550 325 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SDHBP21912 280 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ADORA2AP29274 412 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 CYP2C18P33260 490 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 RFC2P35250 354 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ZEB1P37275 1124 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 USP14P54578 494 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ERVK-21P61565 698 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ZXDAP98168 799 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 MTMR2Q13614 643 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 COL9A2Q14055 689 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 KCTD2Q14681 263 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 COG2Q14746 738 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SMAD2Q15796 467 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 TAF7LQ5H9L4 462 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 FAM47AQ5JRC9 791 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ANO1Q5XXA6 986 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 KRT40Q6A162 431 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 RNF135Q8IUD6 432 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 HERC6Q8IVU3 1022 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ADSSL1Q8N142 457 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ZGPATQ8N5A5 531 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 MB21D1Q8N884 522 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ARNTL2Q8WYA1 636 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 NKD2Q969F2 451 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 VTI1AQ96AJ9 217 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 VWCEQ96DN2 955 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 PABPC5Q96DU9 382 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 BORCS6Q96GS4 357 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 MAML3Q96JK9 1138 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 AGBL1Q96MI9 1066 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 TINF2Q9BSI4 451 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 PAGR1Q9BTK6 254 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SIL1Q9H173 461 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 DHX36Q9H2U1 1008 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 HIPK3Q9H422 1215 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SUGCTQ9HAC7 445 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 SPC25Q9HBM1 224 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 GNL3LQ9NVN8 582 aaKnown RBP2.99□□□□□ -1.93
CPNE3-211ENST00000621526 FAM184BQ9ULE4 1060 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 TRIM35Q9UPQ4 493 aa2.99□□□□□ -1.93
CPNE3-211ENST00000621526 ACACBO00763 2458 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ALPK3Q96L96 1907 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 H0Y858 1186 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 IGSF3O75054 1194 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 BAIAP3O94812 1187 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 SLC25A27O95847 323 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ASGR1P07306 291 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 LDHCP07864 332 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 FCER1AP12319 257 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 ERCC3P19447 782 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 FGFR2P21802 821 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 GJA9P57773 515 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 RHBDL3P58872 404 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 GNAI1P63096 354 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CALD1Q05682 793 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 SIGLEC14Q08ET2 396 aa2.98□□□□□ -1.93
CPNE3-211ENST00000621526 RRP1BQ14684 758 aaKnown RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 CBX2Q14781 532 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-211ENST00000621526 DIXDC1Q155Q3 683 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms