RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 PDCD2Q16342 344 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 VWA3BQ502W6 1294 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 RILPL1Q5EBL4 403 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 MAGEA1P43355 309 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 LRMPQ12912 555 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 PTPROQ16827 1216 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 FAM133BQ5BKY9 247 aaKnown RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 CAPN12Q6ZSI9 719 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 NUDCD3Q8IVD9 361 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ZKSCAN3Q9BRR0 538 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 WDR46O15213 610 aaKnown RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 DTNBO60941 627 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ESR2Q92731 530 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 YY1AP1Q9H869 796 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 PICK1Q9NRD5 415 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ANKFY1Q9P2R3 1169 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 PPME1Q9Y570 386 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 RAD50Q92878 1312 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 VAMP4O75379 141 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 TMTC2Q8N394 836 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 PIP4K2CQ8TBX8 421 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 KIFAP3Q92845 792 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
COL4A6-210ENST00000621266 ZBBXA8MT70 800 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 EFCAB8A8MWE9 144 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
COL4A6-210ENST00000621266 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 TNNI2P48788 182 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 PPP4R1Q8TF05 950 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 ATP7AQ04656 1500 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 POLR2DO15514 142 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 LGSNQ5TDP6 509 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 CSGALNACT2Q8N6G5 542 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 CEP70Q8NHQ1 597 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 CUL4BQ13620 913 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 DPH5Q9H2P9 285 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 MYCP01106 439 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 KRT10P13645 584 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 PAK1Q13153 545 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 SV2BQ7L1I2 683 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 USP26Q9BXU7 913 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 XPO4Q9C0E2 1151 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 YIPF3Q9GZM5 350 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 MYO1AQ9UBC5 1043 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 RNMTO43148 476 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 SP4Q02446 784 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
COL4A6-210ENST00000621266 MIGA1Q8NAN2 632 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 FBXO41Q8TF61 875 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 C6orf50Q9HD87 102 aa10.91□□□□□ -0.66
COL4A6-210ENST00000621266 hCG_2014768A0A024R1R8 64 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 PDE6BP35913 854 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 RCN2Q14257 317 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 RPS6KA2Q15349 733 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 MCTP2Q6DN12 878 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 EP400NLQ6ZTU2 488 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 HOMER3Q9NSC5 361 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 KCNH3Q9ULD8 1083 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 PZPP20742 1482 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 CREB3O43889 395 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 TCIRG1Q13488 830 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 ZKSCAN8Q15776 578 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-210ENST00000621266 CTAGE3PQ8IX95 158 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 NIM1KQ8IY84 436 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 CCDC197Q8NCU1 140 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 CDCA7Q9BWT1 371 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-210ENST00000621266 MED4Q9NPJ6 270 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 IRAK4Q9NWZ3 460 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 A0A087WUV0 522 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-210ENST00000621266 IFNAR2P48551 515 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 DPY19L2Q6NUT2 758 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 TSPYL6Q8N831 410 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 NUP58Q9BVL2 599 aa10.9□□□□□ -0.66
COL4A6-210ENST00000621266 KIF22Q14807 665 aa10.9□□□□□ -0.67
COL4A6-210ENST00000621266 SCYL3Q8IZE3 742 aa10.9□□□□□ -0.67
COL4A6-210ENST00000621266 TSKSQ9UJT2 592 aa10.9□□□□□ -0.67
COL4A6-210ENST00000621266 TNNQ9UQP3 1299 aa10.9□□□□□ -0.67
COL4A6-210ENST00000621266 ADGRL2O95490 1459 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 RPL13P26373 211 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 IFIH1Q9BYX4 1025 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 HELLSQ9NRZ9 838 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 LMBRD1Q9NUN5 540 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 INTUQ9ULD6 942 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms