RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 PLCD1P51178 756 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
SNHG28-203ENST00000621242 POLA2Q14181 598 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 SNX17Q15036 470 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 PRAMEF19Q5SWL8 479 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 MAGEB6Q8N7X4 407 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 CLUAP1Q96AJ1 413 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 PDLIM7Q9NR12 457 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 TLR7Q9NYK1 1049 aaKnown RBP18.97■□□□□ 0.63
SNHG28-203ENST00000621242 DBNLQ9UJU6 430 aaKnown RBP18.97■□□□□ 0.63
SNHG28-203ENST00000621242 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 NAV1Q8NEY1 1877 aa18.97■□□□□ 0.63
SNHG28-203ENST00000621242 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
SNHG28-203ENST00000621242 SEPT4O43236 478 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 COBLO75128 1261 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 SURF6O75683 361 aaKnown RBP18.96■□□□□ 0.63
SNHG28-203ENST00000621242 COG2Q14746 738 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 SEPT2Q15019 361 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 CERS3Q8IU89 383 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 FRAT1Q92837 279 aaPredicted RBP18.96■□□□□ 0.63
SNHG28-203ENST00000621242 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
SNHG28-203ENST00000621242 SPATC1LQ9H0A9 340 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
SNHG28-203ENST00000621242 HOXC10Q9NYD6 342 aa18.96■□□□□ 0.63
SNHG28-203ENST00000621242 A0A1W2PRG0 241 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 FOSL2P15408 326 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 ERCC3P19447 782 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 LRRC41Q15345 812 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 PRDM6Q9NQX0 595 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 MYH8P13535 1937 aa18.95■□□□□ 0.62
SNHG28-203ENST00000621242 MUC3AQ02505 3323 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 BCAR3O75815 825 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 SHCBP1Q8NEM2 672 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 TANGO6Q9C0B7 1094 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
SNHG28-203ENST00000621242 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
SNHG28-203ENST00000621242 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 PLXNA1Q9UIW2 1896 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
SNHG28-203ENST00000621242 ITGB8P26012 769 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 TLE2Q04725 743 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 FAM47AQ5JRC9 791 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 C1orf53Q5VUE5 145 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
SNHG28-203ENST00000621242 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 MYO9BQ13459 2157 aa18.93■□□□□ 0.62
SNHG28-203ENST00000621242 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
SNHG28-203ENST00000621242 EVX2Q03828 476 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 PLS1Q14651 629 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 NCAPG2Q86XI2 1143 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 TMEM57Q8N5G2 664 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
SNHG28-203ENST00000621242 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
SNHG28-203ENST00000621242 EPHB4P54760 987 aa18.91■□□□□ 0.62
SNHG28-203ENST00000621242 GABPAQ06546 454 aa18.91■□□□□ 0.62
SNHG28-203ENST00000621242 MROH8Q9H579 483 aa18.91■□□□□ 0.62
SNHG28-203ENST00000621242 C1orf115Q9H7X2 142 aa18.91■□□□□ 0.62
SNHG28-203ENST00000621242 TACC3Q9Y6A5 838 aa18.91■□□□□ 0.62
SNHG28-203ENST00000621242 DSG3P32926 999 aa18.9■□□□□ 0.62
SNHG28-203ENST00000621242 ABRAQ8N0Z2 381 aa18.9■□□□□ 0.62
SNHG28-203ENST00000621242 MB21D1Q8N884 522 aa18.9■□□□□ 0.62
SNHG28-203ENST00000621242 SYMPKQ92797 1274 aaKnown RBP18.9■□□□□ 0.62
SNHG28-203ENST00000621242 RNPC3Q96LT9 517 aaKnown RBP18.9■□□□□ 0.62
SNHG28-203ENST00000621242 PHF24Q9UPV7 400 aa18.9■□□□□ 0.62
SNHG28-203ENST00000621242 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
SNHG28-203ENST00000621242 MAGEB6P1A0A0J9YX57 407 aa18.89■□□□□ 0.61
SNHG28-203ENST00000621242 CLTBP09497 229 aa18.89■□□□□ 0.61
SNHG28-203ENST00000621242 ATG4CQ96DT6 458 aa18.89■□□□□ 0.61
SNHG28-203ENST00000621242 XPNPEP3Q9NQH7 507 aa18.89■□□□□ 0.61
SNHG28-203ENST00000621242 MCM9Q9NXL9 1143 aa18.89■□□□□ 0.61
SNHG28-203ENST00000621242 TMEM265A0A087WTH1 108 aa18.88■□□□□ 0.61
SNHG28-203ENST00000621242 FLOT1O75955 427 aa18.88■□□□□ 0.61
SNHG28-203ENST00000621242 FCER1AP12319 257 aa18.88■□□□□ 0.61
SNHG28-203ENST00000621242 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
SNHG28-203ENST00000621242 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
SNHG28-203ENST00000621242 PQBP1O60828 265 aaKnown RBP18.87■□□□□ 0.61
SNHG28-203ENST00000621242 NCOR1O75376 2440 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 PGK1P00558 417 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 RARBP10826 455 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 RAG1P15918 1043 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 GRIN2CQ14957 1233 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 CLEC10AQ8IUN9 316 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
SNHG28-203ENST00000621242 BAZ2AQ9UIF9 1905 aaKnown RBP18.87■□□□□ 0.61
SNHG28-203ENST00000621242 KIAA0355O15063 1070 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 TMEM132BQ14DG7 1078 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 RNF180Q86T96 592 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 USP38Q8NB14 1042 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 SLC44A5Q8NCS7 719 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
SNHG28-203ENST00000621242 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
SNHG28-203ENST00000621242 TMEM39AQ9NV64 488 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms