RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 PTPN18Q99952 460 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 UBAC1Q9BSL1 405 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
POLR2J3-221ENST00000621093 MANSC4A6NHS7 340 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 RAD21O60216 631 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 RPS6KB1P23443 525 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 ANAPC15P60006 121 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 NOGQ13253 232 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 IL17RAQ96F46 866 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
POLR2J3-221ENST00000621093 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 BTBD19C9JJ37 291 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 F5H6K3 240 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 IGF2BP3O00425 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 NDUFB10O96000 172 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 CETPP11597 493 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 PSMA5P28066 241 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 NT5C2P49902 561 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 KLRC3Q07444 240 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 WTAPQ15007 396 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 Q6ZUG5 572 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 DGKHQ86XP1 1220 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 TTC14Q96N46 770 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
POLR2J3-221ENST00000621093 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 VCAM1P19320 739 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 TM4SF4P48230 202 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 SLFN13Q68D06 897 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 SH2D4AQ9H788 454 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 MYH6P13533 1939 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
POLR2J3-221ENST00000621093 ERICH2A1L162 156 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 MAP2K2P36507 400 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 USP14P54578 494 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 GMCL1P1Q8NEA9 526 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
POLR2J3-221ENST00000621093 PDHXO00330 501 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 RXRAP19793 462 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 SREBF2Q12772 1141 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 NFXL1Q6ZNB6 911 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 ZNF654Q8IZM8 581 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 BRF1Q92994 677 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 MTA3Q9BTC8 594 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
POLR2J3-221ENST00000621093 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 PEX10O60683 326 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 CYP2C8P10632 490 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 PDHBP11177 359 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 BMP3P12645 472 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 LIFRP42702 1097 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 NEK4P51957 841 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms