RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 PKP1Q13835 747 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 IFNL3Q8IZI9 196 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 ZNF280CQ8ND82 737 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 ARID3AQ99856 593 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
GTF2I-219ENST00000621040 CCL15-CCL14A0A0B4J2E2 113 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 CCL15Q16663 113 aa10.18□□□□□ -0.78
GTF2I-219ENST00000621040 COL13A1Q5TAT6 717 aaPredicted RBP10.18□□□□□ -0.78
GTF2I-219ENST00000621040 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
GTF2I-219ENST00000621040 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 RASA1P20936 1047 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 USP5P45974 858 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 BACE1P56817 501 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 FAM227BQ96M60 508 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 SLC4A4Q9Y6R1 1079 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 GPR25O00155 361 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 ORC4O43929 436 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 TLR2O60603 784 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 CDK8P49336 464 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 NMIQ13287 307 aaPredicted RBP10.17□□□□□ -0.78
GTF2I-219ENST00000621040 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
GTF2I-219ENST00000621040 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
GTF2I-219ENST00000621040 FASTKD5Q7L8L6 764 aaKnown RBP10.17□□□□□ -0.78
GTF2I-219ENST00000621040 MKL1Q969V6 931 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 AIDAQ96BJ3 306 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 MORF4L1Q9UBU8 362 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 ADAMTS5Q9UNA0 930 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 CTGFP29279 349 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
GTF2I-219ENST00000621040 CNPY4Q8N129 248 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
GTF2I-219ENST00000621040 PTMSP20962 102 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 CLEC17AQ6ZS10 378 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 CCDC17Q96LX7 622 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 MCM9Q9NXL9 1143 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 USP17L21D6R901 530 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 TREML2Q5T2D2 321 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 VPS53Q5VIR6 699 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 TMEM179Q6ZVK1 233 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 ZNF296Q8WUU4 475 aaPredicted RBP10.16□□□□□ -0.78
GTF2I-219ENST00000621040 CHAMP1Q96JM3 812 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 DSCC1Q9BVC3 393 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 AS3MTQ9HBK9 375 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 TCP11L1Q9NUJ3 509 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 HIP1O00291 1037 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 CNMDO75829 334 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 KIAA1755Q5JYT7 1200 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 PICK1Q9NRD5 415 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 ZHX2Q9Y6X8 837 aa10.16□□□□□ -0.78
GTF2I-219ENST00000621040 CYP2D7A0A087X1C5 515 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 HSPD1P10809 573 aaKnown RBP10.15□□□□□ -0.78
GTF2I-219ENST00000621040 PCP11498 1178 aaKnown RBP10.15□□□□□ -0.78
GTF2I-219ENST00000621040 DYNLL2Q96FJ2 89 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 TMX2Q9Y320 296 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 DOCK3Q8IZD9 2030 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 ALPK3Q96L96 1907 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 MYPNQ86TC9 1320 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 PDHXO00330 501 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 GABPB1Q06547 395 aaPredicted RBP10.15□□□□□ -0.78
GTF2I-219ENST00000621040 CERKLQ49MI3 558 aaPredicted RBP10.15□□□□□ -0.78
GTF2I-219ENST00000621040 SLC44A5Q8NCS7 719 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.78
GTF2I-219ENST00000621040 TRPA1O75762 1119 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 TBC1D8O95759 1140 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 GNRH1P01148 92 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 GH2P01242 217 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 AKR1B1P15121 316 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 CHMLP26374 656 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 ABCB5Q2M3G0 1257 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 CCDC129Q6ZRS4 1044 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 ZSCAN29Q8IWY8 852 aaPredicted RBP10.14□□□□□ -0.79
GTF2I-219ENST00000621040 NKX2-3Q8TAU0 364 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 STAG1Q8WVM7 1258 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 ZDHHC9Q9Y397 364 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 HSCBQ8IWL3 235 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 NYAP2Q9P242 653 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 TNRC18O15417 2968 aaPredicted RBP10.14□□□□□ -0.79
GTF2I-219ENST00000621040 FKTNO75072 461 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
GTF2I-219ENST00000621040 PPARAQ07869 468 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 PKN2Q16513 984 aaKnown RBP10.14□□□□□ -0.79
GTF2I-219ENST00000621040 OTUD7BQ6GQQ9 843 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
GTF2I-219ENST00000621040 GDF11O95390 407 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 GMCL1P1Q8NEA9 526 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 NEDD1Q8NHV4 660 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 GTF3C2Q8WUA4 911 aaPredicted RBP10.13□□□□□ -0.79
GTF2I-219ENST00000621040 ANKS1AQ92625 1134 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 USP6NLQ92738 828 aa10.13□□□□□ -0.79
GTF2I-219ENST00000621040 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms