RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 WHAMMP3Q1A5X7 153 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 KRT25Q7Z3Z0 450 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 GOLPH3LQ9H4A5 285 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 C6orf163Q5TEZ5 329 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC121Q6ZUS5 278 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 PGBD1Q96JS3 809 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 NOX5Q96PH1 765 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 SEC31AO94979 1220 aaKnown RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 SPATA1Q5VX52 437 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 NSRP1Q9H0G5 558 aaKnown RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 GOLGA6AQ9NYA3 693 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 MAP3K15Q6ZN16 1313 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 NCAPD2Q15021 1401 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ANKARQ7Z5J8 1434 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ERCC3P19447 782 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 TAF12Q16514 161 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 SLFNL1Q499Z3 407 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC63Q8NA47 563 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 MAN1B1Q9UKM7 699 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ADD2P35612 726 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 HSPA2P54652 639 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 TFAP4Q01664 338 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PCDHA5Q9Y5H7 936 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PHLPP2Q6ZVD8 1323 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PIK3C2BO00750 1634 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 SMIM23A6NLE4 172 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 GNPATO15228 680 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 UTP14CQ5TAP6 766 aaKnown RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PLA2G4DQ86XP0 818 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 RAB3IL1Q8TBN0 382 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ARPP21Q9UBL0 812 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 DLC1Q96QB1 1528 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 ADCY7P51828 1080 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 MXRA7P84157 204 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 CALCRLQ16602 461 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 EPHA10Q5JZY3 1008 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 APBB1IPQ7Z5R6 666 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PSMB7Q99436 277 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 IQCGQ9H095 443 aaKnown RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 LRWD1Q9UFC0 647 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 GYG1P46976 350 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 PI16Q6UXB8 463 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 GRAMD1CQ8IYS0 662 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 SPTLC3Q9NUV7 552 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.922e-7■■■□□ 15.7
ALMS1-208ENST00000620466 TBC1D7Q9P0N9 293 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 BIN2Q9UBW5 565 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-208ENST00000620466 NCOA3Q9Y6Q9 1424 aa9.29□□□□□ -0.92
ALMS1-208ENST00000620466 STX10O60499 249 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 KIF4AO95239 1232 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 RBL2Q08999 1139 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 BLIDQ8IZY5 108 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 GOLGA6BA6NDN3 693 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 UFL1O94874 794 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 RPN1P04843 607 aaKnown RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 TGFBRAP1Q8WUH2 860 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 IFT20Q8IY31 132 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 CLTCQ00610 1675 aaKnown RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 USP17L21D6R901 530 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 CALUO43852 315 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 DDAH1O94760 285 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 IGKV5-2P06315 115 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 SP4Q02446 784 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 VWA3BQ502W6 1294 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 MAPKAPK5Q8IW41 473 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 EYA3Q99504 573 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 LZTS2Q9BRK4 669 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 STMN4Q9H169 189 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 RABEP2Q9H5N1 569 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 PDE8BO95263 885 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 DDIT3P35638 169 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC24Q8N4L8 307 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 IPO4Q8TEX9 1081 aaKnown RBP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
ALMS1-208ENST00000620466 TCHPQ9BT92 498 aa9.28□□□□□ -0.92
ALMS1-208ENST00000620466 CASP14P31944 242 aa9.27□□□□□ -0.92
ALMS1-208ENST00000620466 CHRNDQ07001 517 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms