RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 TNFRSF25Q93038 417 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 TIGD1Q96MW7 591 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 CBX8Q9HC52 389 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 RTN4Q9NQC3 1192 aaKnown RBP21.88■■□□□ 1.09
PSPC1-206ENST00000619300 SH3GLB2Q9NR46 395 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 SWAP70Q9UH65 585 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 SERPINB13Q9UIV8 391 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 FOCADQ5VW36 1801 aa21.88■■□□□ 1.09
PSPC1-206ENST00000619300 C21orf2O43822 256 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 PTPREP23469 700 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 SYKP43405 635 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 DNAJC25Q9H1X3 360 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 ESPNB1AK53 854 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 ADCY5O95622 1261 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 ATP2B1P20020 1258 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 ZNF165P49910 485 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 STX1AQ16623 288 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 GRIPAP1Q4V328 841 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 EARS2Q5JPH6 523 aaKnown RBP21.87■■□□□ 1.09
PSPC1-206ENST00000619300 MTMR7Q9Y216 660 aa21.87■■□□□ 1.09
PSPC1-206ENST00000619300 FAM205CA6NFA0 338 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 TRIM75PA6NK02 468 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 LUZP1Q86V48 1076 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 TTLL6Q8N841 843 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 SLC16A10Q8TF71 515 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 RRAGDQ9NQL2 400 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-206ENST00000619300 FBXO2Q9UK22 296 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-206ENST00000619300 MORC2Q9Y6X9 1032 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-206ENST00000619300 PLIN4Q96Q06 1357 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 C10orf71Q711Q0 1435 aa21.86■■□□□ 1.09
PSPC1-206ENST00000619300 CYTH3O43739 400 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 HLA-DOAP06340 250 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 CALML3P27482 149 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 NFIAQ12857 509 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 SLC35G1Q2M3R5 365 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 MTMR4Q9NYA4 1195 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 KIAA1468Q9P260 1216 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 SERPINA10Q9UK55 444 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 NOL7Q9UMY1 257 aaKnown RBP21.85■■□□□ 1.09
PSPC1-206ENST00000619300 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 PARP1P09874 1014 aaKnown RBP21.85■■□□□ 1.09
PSPC1-206ENST00000619300 RBM5P52756 815 aaKnown RBP eCLIP21.85■■□□□ 1.09
PSPC1-206ENST00000619300 ANO10Q9NW15 660 aa21.85■■□□□ 1.09
PSPC1-206ENST00000619300 SRPRBQ9Y5M8 271 aaKnown RBP21.85■■□□□ 1.09
PSPC1-206ENST00000619300 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 ZNF579Q8NAF0 562 aaKnown RBP21.84■■□□□ 1.09
PSPC1-206ENST00000619300 MYO3BQ8WXR4 1341 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.84■■□□□ 1.09
PSPC1-206ENST00000619300 IGKV6D-41A0A0C4DH26 115 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 GOLGA8HP0CJ92 632 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 AKR1B1P15121 316 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 ERCC4Q92889 916 aaPredicted RBP21.84■■□□□ 1.09
PSPC1-206ENST00000619300 SPZ1Q9BXG8 430 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 CCDC39Q9UFE4 941 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 KCNH3Q9ULD8 1083 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 PCDHAC2Q9Y5I4 1007 aa21.84■■□□□ 1.09
PSPC1-206ENST00000619300 AP5Z1O43299 807 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 BMP15O95972 392 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 SMARCA1P28370 1054 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 SHMT1P34896 483 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 PLCB2Q00722 1185 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 ZFPM1Q8IX07 1006 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 RTKN2Q8IZC4 609 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 IDI2Q9BXS1 227 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 EHD4Q9H223 541 aa21.83■■□□□ 1.09
PSPC1-206ENST00000619300 BAZ2BQ9UIF8 2168 aaKnown RBP21.83■■□□□ 1.08
PSPC1-206ENST00000619300 CCDC93Q567U6 631 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 NOM1Q5C9Z4 860 aaKnown RBP21.82■■□□□ 1.08
PSPC1-206ENST00000619300 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 GPKOWQ92917 476 aaPredicted RBP eCLIP21.82■■□□□ 1.08
PSPC1-206ENST00000619300 DHX36Q9H2U1 1008 aaKnown RBP21.82■■□□□ 1.08
PSPC1-206ENST00000619300 YDJCA8MPS7 323 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 KCNA3P22001 575 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 TRAPPC10P48553 1259 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 GRIN1Q05586 938 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-206ENST00000619300 ZSCAN30Q86W11 494 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 BLIDQ8IZY5 108 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 FAM13BQ9NYF5 915 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 PCDHA4Q9UN74 947 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 SCN9AQ15858 1988 aa21.82■■□□□ 1.08
PSPC1-206ENST00000619300 NPM3O75607 178 aaKnown RBP21.81■■□□□ 1.08
PSPC1-206ENST00000619300 IQCB1Q15051 598 aa21.81■■□□□ 1.08
PSPC1-206ENST00000619300 FAM177A1Q8N128 213 aaPredicted RBP21.81■■□□□ 1.08
PSPC1-206ENST00000619300 BARHL2Q9NY43 387 aa21.81■■□□□ 1.08
PSPC1-206ENST00000619300 USP17L5A8MUK1 530 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 DPEP1P16444 411 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 CACNB3P54284 484 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 SPECC1Q5M775 1068 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 TTC38Q5R3I4 469 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 WWC2Q6AWC2 1192 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 GALNT17Q6IS24 598 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 PIK3AP1Q6ZUJ8 805 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 RASGRP2Q7LDG7 609 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 PSMD1Q99460 953 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 FAM198AQ9UFP1 575 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 ADAMTSL1Q8N6G6 1762 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 TTLL1O95922 423 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 TCP10Q12799 353 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms