RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 CDX2Q99626 313 aaPredicted RBP11.03□□□□□ -0.64
SYN3-213ENST00000619146 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
SYN3-213ENST00000619146 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
SYN3-213ENST00000619146 LRP2BPQ9P2M1 347 aa11.03□□□□□ -0.64
SYN3-213ENST00000619146 RBPJLQ9UBG7 517 aa11.03□□□□□ -0.64
SYN3-213ENST00000619146 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
SYN3-213ENST00000619146 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
SYN3-213ENST00000619146 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.65
SYN3-213ENST00000619146 IDH1O75874 414 aaKnown RBP11.02□□□□□ -0.65
SYN3-213ENST00000619146 REC8O95072 547 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 BACE1P56817 501 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 ERVK-24P63145 666 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 SHHQ15465 462 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 SOCS4Q8WXH5 440 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
SYN3-213ENST00000619146 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.65
SYN3-213ENST00000619146 PIH1D3Q9NQM4 214 aaKnown RBP11.02□□□□□ -0.65
SYN3-213ENST00000619146 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
SYN3-213ENST00000619146 RAPGEFL1Q9UHV5 662 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
SYN3-213ENST00000619146 CYP2C19P33261 490 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 RGS2P41220 211 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 RTP1P59025 263 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 UBE3CQ15386 1083 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 MORN1Q5T089 497 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 GJC2Q5T442 439 aaPredicted RBP11.01□□□□□ -0.65
SYN3-213ENST00000619146 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 CRACR2BQ8N4Y2 399 aaPredicted RBP11.01□□□□□ -0.65
SYN3-213ENST00000619146 TGFBRAP1Q8WUH2 860 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 USP6NLQ92738 828 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
SYN3-213ENST00000619146 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 PALD1Q9ULE6 856 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 RAD50Q92878 1312 aa11.01□□□□□ -0.65
SYN3-213ENST00000619146 USP17L10C9JJH3 530 aa11□□□□□ -0.65
SYN3-213ENST00000619146 XRCC5P13010 732 aaKnown RBP11□□□□□ -0.65
SYN3-213ENST00000619146 PDE6AP16499 860 aa11□□□□□ -0.65
SYN3-213ENST00000619146 MAPK4P31152 587 aa11□□□□□ -0.65
SYN3-213ENST00000619146 MFAP1P55081 439 aaKnown RBP11□□□□□ -0.65
SYN3-213ENST00000619146 GSTO1P78417 241 aa11□□□□□ -0.65
SYN3-213ENST00000619146 MCMDC2Q4G0Z9 681 aa11□□□□□ -0.65
SYN3-213ENST00000619146 CWC27Q6UX04 472 aaKnown RBP11□□□□□ -0.65
SYN3-213ENST00000619146 KIAA1211Q6ZU35 1233 aa11□□□□□ -0.65
SYN3-213ENST00000619146 NPLOC4Q8TAT6 608 aa11□□□□□ -0.65
SYN3-213ENST00000619146 APPBP2Q92624 585 aa11□□□□□ -0.65
SYN3-213ENST00000619146 BADQ92934 168 aa11□□□□□ -0.65
SYN3-213ENST00000619146 APBA2Q99767 749 aa11□□□□□ -0.65
SYN3-213ENST00000619146 WDR18Q9BV38 432 aa11□□□□□ -0.65
SYN3-213ENST00000619146 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
SYN3-213ENST00000619146 SEMA6BQ9H3T3 888 aa11□□□□□ -0.65
SYN3-213ENST00000619146 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
SYN3-213ENST00000619146 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
SYN3-213ENST00000619146 PRKAG2Q9UGJ0 569 aa11□□□□□ -0.65
SYN3-213ENST00000619146 A0A0G2JMZ2 1700 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 SGSM2O43147 1006 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 CNMDO75829 334 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 LDHCP07864 332 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 ASNSP08243 561 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 ADD2P35612 726 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 ZMYM1Q5SVZ6 1142 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 MFSD14CQ5VZR4 134 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 SH3RF1Q7Z6J0 888 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 FERMT2Q96AC1 680 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 FEZ1Q99689 392 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 TTYH1Q9H313 450 aaPredicted RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 DDX20Q9UHI6 824 aaKnown RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 HERC5Q9UII4 1024 aaKnown RBP10.99□□□□□ -0.65
SYN3-213ENST00000619146 ZBTB21Q9ULJ3 1066 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 MUC3AQ02505 3323 aa10.99□□□□□ -0.65
SYN3-213ENST00000619146 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 MYH7P12883 1935 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 GH2P01242 217 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 FOSL2P15408 326 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
SYN3-213ENST00000619146 ATP2B2Q01814 1243 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
SYN3-213ENST00000619146 NAA16Q6N069 864 aaPredicted RBP10.98□□□□□ -0.65
SYN3-213ENST00000619146 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
SYN3-213ENST00000619146 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 FAM227BQ96M60 508 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 TBC1D2Q9BYX2 928 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 CHD9Q3L8U1 2897 aa10.98□□□□□ -0.65
SYN3-213ENST00000619146 A0A0D9SFI3 127 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 C19orf81C9J6K1 198 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms