RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MYH6P13533 1939 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 NFKBIEO00221 500 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 NR1I2O75469 434 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 DLGAP5Q15398 846 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 PPP1R9BQ96SB3 815 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 RTEL1Q9NZ71 1219 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 MAD2L2Q9UI95 211 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 COL2A1P02458 1487 aaPredicted RBP14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 MYH8P13535 1937 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 TOP1P11387 765 aaKnown RBP14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 U2AF2P26368 475 aaKnown RBP eCLIP14.65□□□□□ -0.062e-16■■■■□ 24.9
TNFAIP3-209ENST00000619035 CXCL9Q07325 125 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 NR5A1Q13285 461 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 SF3A1Q15459 793 aaKnown RBP14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 NOSTRINQ8IVI9 506 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 LRRC47Q8N1G4 583 aaKnown RBP14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 TRIM44Q96DX7 344 aaPredicted RBP14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 TMOD2Q9NZR1 351 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 PLIN4Q96Q06 1357 aa14.65□□□□□ -0.06
TNFAIP3-209ENST00000619035 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 TCP10L2B9ZVM9 353 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 ENTPD3O75355 529 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 PPP4R3BQ5MIZ7 849 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 NLGN2Q8NFZ4 835 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 OXER1Q8TDS5 423 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 DNAJC18Q9H819 358 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 MTMR4Q9NYA4 1195 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 SCG2P13521 617 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 NOVP48745 357 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 USP17L2Q6R6M4 530 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 MTMR14Q8NCE2 650 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 LINC00301Q8NCQ3 95 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 SPON1Q9HCB6 807 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
TNFAIP3-209ENST00000619035 GNAQP50148 359 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 RASSF7Q02833 373 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 TNIP1Q15025 636 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 CPVLQ9H3G5 476 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 UTRNP46939 3433 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 PARP1P09874 1014 aaKnown RBP14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 VEGFAP15692 232 aaPredicted RBP14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 KCNG4Q8TDN1 519 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 PHF20Q9BVI0 1012 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 FOXP1Q9H334 677 aaPredicted RBP14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 VEZTQ9HBM0 779 aa14.63□□□□□ -0.07
TNFAIP3-209ENST00000619035 ATRNL1Q5VV63 1379 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 SPTLC2O15270 562 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 LETM1O95202 739 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 YEATS4O95619 227 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 TTLL1O95922 423 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 PFKFB3Q16875 520 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 CERKLQ49MI3 558 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 FKBP1CQ5VVH2 108 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 CCAR1Q8IX12 1150 aaKnown RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.072e-6■■■■■ 37.1
TNFAIP3-209ENST00000619035 CSRNP1Q96S65 589 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 GOLPH3LQ9H4A5 285 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 PCDHA7Q9UN72 937 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 FRMPD2Q68DX3 1309 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 IGKV6D-41A0A0C4DH26 115 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 PALM3A6NDB9 673 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 USP17L5A8MUK1 530 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 ATP2B1P20020 1258 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 RPS12P25398 132 aaKnown RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 KRT2P35908 639 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 ZNF70Q9UC06 446 aaPredicted RBP14.62□□□□□ -0.07
TNFAIP3-209ENST00000619035 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 CYTH3O43739 400 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 RAD21O60216 631 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 GDF11O95390 407 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 NLRP5P59047 1200 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 SLC35G1Q2M3R5 365 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 METTL16Q86W50 562 aaKnown RBP14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 TNMDQ9H2S6 317 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 HEATR3Q7Z4Q2 680 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 HOMER1Q86YM7 354 aa14.61□□□□□ -0.07
TNFAIP3-209ENST00000619035 PDLIM2Q96JY6 352 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms