RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 MORC3Q14149 939 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
CNOT3-210ENST00000618939 GSDMAQ96QA5 445 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 SPTLC3Q9NUV7 552 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 KCNJ18B7U540 433 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 ATP1A3P13637 1013 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 DYNLL1P63167 89 aaKnown RBP15.57■□□□□ 0.08
CNOT3-210ENST00000618939 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 PLA2G4DQ86XP0 818 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 SNX29Q8TEQ0 813 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
CNOT3-210ENST00000618939 SCARF1Q14162 830 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 FCHSD1Q86WN1 690 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
CNOT3-210ENST00000618939 GPKOWQ92917 476 aaPredicted RBP eCLIP15.57■□□□□ 0.082e-6■■■□□ 15.9
CNOT3-210ENST00000618939 CCDC172P0C7W6 258 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 PTPN21Q16825 1174 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 INF2Q27J81 1249 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 MAN1B1Q9UKM7 699 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 GOLGA8FQ08AF8 430 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 GOLGA8DPQ0D2H9 430 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 SUSD4Q5VX71 490 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 NAP1L4Q99733 375 aaKnown RBP15.56■□□□□ 0.08
CNOT3-210ENST00000618939 WDR19Q8NEZ3 1342 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 SNAP23O00161 211 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 POTEJP0CG39 1038 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 ADCY7P51828 1080 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
CNOT3-210ENST00000618939 GPR161Q8N6U8 529 aaKnown RBP15.56■□□□□ 0.08
CNOT3-210ENST00000618939 OR8K1Q8NGG5 319 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 EYA3Q99504 573 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 FAM107BQ9H098 131 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 TNS3Q68CZ2 1445 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 SMCO2A6NFE2 343 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 IVLP07476 585 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 DYMQ7RTS9 669 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 PCDHB6Q9Y5E3 794 aa15.56■□□□□ 0.08
CNOT3-210ENST00000618939 SELENOOQ9BVL4 669 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 CCDC113Q9H0I3 377 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 CDHR2Q9BYE9 1310 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 EFCAB8A8MWE9 144 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 CETN2P41208 172 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 RFX5P48382 616 aaPredicted RBP15.55■□□□□ 0.08
CNOT3-210ENST00000618939 KAZALD1Q96I82 304 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 SLFN14P0C7P3 912 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 CALCRLQ16602 461 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 ENOX1Q8TC92 643 aaKnown RBP15.55■□□□□ 0.08
CNOT3-210ENST00000618939 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
CNOT3-210ENST00000618939 C1orf167Q5SNV9 1468 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 SEMA3EO15041 775 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 OPA1O60313 960 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 TRAPPC10P48553 1259 aa15.55■□□□□ 0.08
CNOT3-210ENST00000618939 H7C1D1 291 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 VAV2P52735 878 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 CCDC144BQ3MJ40 725 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 HS2ST1Q7LGA3 356 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 SRPRBQ9Y5M8 271 aaKnown RBP15.54■□□□□ 0.08
CNOT3-210ENST00000618939 NEDD4P46934 1319 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 SOS2Q07890 1332 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-210ENST00000618939 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 RPN1P04843 607 aaKnown RBP15.54■□□□□ 0.08
CNOT3-210ENST00000618939 RAPGEF1Q13905 1077 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 VSTM4Q8IW00 320 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 ZNF804BA4D1E1 1349 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 FAM13AO94988 1023 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 LONP1P36776 959 aaKnown RBP15.54■□□□□ 0.08
CNOT3-210ENST00000618939 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
CNOT3-210ENST00000618939 SECISBP2LQ93073 1101 aaKnown RBP15.53■□□□□ 0.08
CNOT3-210ENST00000618939 RSPH14Q9UHP6 348 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 ABCC12Q96J65 1359 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 CYP2D7A0A087X1C5 515 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
CNOT3-210ENST00000618939 SMYD4Q8IYR2 804 aaPredicted RBP15.53■□□□□ 0.08
CNOT3-210ENST00000618939 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 GOLGA8HP0CJ92 632 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 NEFHP12036 1026 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 KRT13P13646 458 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 ERCC3P19447 782 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 RESP18Q5W5W9 173 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 CCDC84Q86UT8 332 aaPredicted RBP15.53■□□□□ 0.08
CNOT3-210ENST00000618939 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 GALNT17Q6IS24 598 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 KCNB2Q92953 911 aa15.53■□□□□ 0.08
CNOT3-210ENST00000618939 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
CNOT3-210ENST00000618939 MAGEA1P43355 309 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 ERFEQ4G0M1 354 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 MICALCLQ6ZW33 695 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 DYDC1Q8WWB3 177 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 SAMSN1Q9NSI8 373 aaKnown RBP15.52■□□□□ 0.08
CNOT3-210ENST00000618939 BIN2Q9UBW5 565 aaPredicted RBP15.52■□□□□ 0.08
CNOT3-210ENST00000618939 GOLGA6L10A0A0M3HER8 536 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 OR52Z1P0C646 297 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 PTPREP23469 700 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 CASP14P31944 242 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 DNM2P50570 870 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms