RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, human

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-220	ENST00000618606	GPR62	Q9BZJ7	368 aa		5.75	□□□□□ -1.49
TARDBP-220	ENST00000618606	GPATCH2	Q9NW75	528 aa		5.75	□□□□□ -1.49
TARDBP-220	ENST00000618606	PCDHB5	Q9Y5E4	795 aa		5.75	□□□□□ -1.49
TARDBP-220	ENST00000618606	AK5	Q9Y6K8	562 aa		5.75	□□□□□ -1.49
TARDBP-220	ENST00000618606	OTOL1	A6NHN0	477 aa	Predicted RBP	5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	EIF4B	P23588	611 aa	Known RBP	5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	PDE6B	P35913	854 aa		5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	ERICH6B	Q5W0A0	696 aa		5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	SPPL2C	Q8IUH8	684 aa		5.74	□□□□□ -1.49
TARDBP-220	ENST00000618606	PRPF40A	O75400	957 aa	Known RBP	5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	ADRB1	P08588	477 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	CHRNE	Q04844	493 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	CCDC85B	Q15834	202 aa	Predicted RBP	5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	SLC6A19	Q695T7	634 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	DNAJB8	Q8NHS0	232 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	SHISA4	Q96DD7	197 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	SIGLEC10	Q96LC7	697 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	TJP2	Q9UDY2	1190 aa		5.73	□□□□□ -1.49
TARDBP-220	ENST00000618606	SEPT6	Q14141	434 aa		5.72	□□□□□ -1.49
TARDBP-220	ENST00000618606	DACT3	Q96B18	629 aa	Predicted RBP	5.72	□□□□□ -1.49
TARDBP-220	ENST00000618606	HRK	O00198	91 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	PI3	P19957	117 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	LIG3	P49916	1009 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	MCAT	Q8IVS2	390 aa	Known RBP	5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	ANKS4B	Q8N8V4	417 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	PANK1	Q8TE04	598 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	SYTL4	Q96C24	671 aa	Predicted RBP	5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	TMEM87B	Q96K49	555 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	TMPRSS5	Q9H3S3	457 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	RNF19A	Q9NV58	838 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	MBD1	Q9UIS9	605 aa	Predicted RBP	5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	GPR160	Q9UJ42	338 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	CEP131	Q9UPN4	1083 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	PCDHA11	Q9Y5I1	949 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	IRAK3	Q9Y616	596 aa		5.71	□□□□□ -1.5
TARDBP-220	ENST00000618606	OR14I1	A6ND48	311 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	PSPN	O60542	156 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	PGR	P06401	933 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	TFE3	P19532	575 aa	Predicted RBP	5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	LMNB1	P20700	586 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	LTK	P29376	864 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	AFF3	P51826	1226 aa	Known RBP	5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	DUSP4	Q13115	394 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	TSNAXIP1	Q2TAA8	658 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	DTWD2	Q8NBA8	298 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	DPH2	Q9BQC3	489 aa	Predicted RBP	5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	EBF1	Q9UH73	591 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	ADAM30	Q9UKF2	790 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	KCNH3	Q9ULD8	1083 aa		5.7	□□□□□ -1.5
TARDBP-220	ENST00000618606	SLC22A31	A6NKX4	558 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	RPL6	Q02878	288 aa	Known RBP	5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	PDE4B	Q07343	736 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	PPP1R13L	Q8WUF5	828 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	LINC01599	Q8WXQ3	324 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	ACSF2	Q96CM8	615 aa	Predicted RBP	5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	DUSP9	Q99956	384 aa	Known RBP	5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	TRAIP	Q9BWF2	469 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	MIR1-1HG	Q9H1L0	117 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	TIMELESS	Q9UNS1	1208 aa		5.69	□□□□□ -1.5
TARDBP-220	ENST00000618606	RLBP1	P12271	317 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	SRSF3	P84103	164 aa	Known RBP	5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	MAP3K11	Q16584	847 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	CCDC84	Q86UT8	332 aa	Predicted RBP	5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	SP8	Q8IXZ3	490 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	FEZF2	Q8TBJ5	459 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	TEPSIN	Q96N21	525 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	KRTAP9-8	Q9BYQ0	159 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	ZNF281	Q9Y2X9	895 aa		5.68	□□□□□ -1.5
TARDBP-220	ENST00000618606	NOTO	A8MTQ0	251 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	PATL2	C9JE40	543 aa	Known RBP	5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	N4BP3	O15049	544 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	TEK	Q02763	1124 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	EFEMP1	Q12805	493 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	SPATS1	Q496A3	300 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	MEI1	Q5TIA1	1274 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	NLRX1	Q86UT6	975 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	NOC4L	Q9BVI4	516 aa	Known RBP	5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	SIRT5	Q9NXA8	310 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	USP31	Q70CQ4	1352 aa		5.67	□□□□□ -1.5
TARDBP-220	ENST00000618606	ZC3H12D	A2A288	527 aa	Known RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	ANKRD33B	A6NCL7	494 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	ST13	P50502	369 aa	Known RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	GALK1	P51570	392 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	TAF1C	Q15572	869 aa	Predicted RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	EAPP	Q56P03	285 aa	Predicted RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	ADGRF1	Q5T601	910 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	ZDHHC14	Q8IZN3	488 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	PHC3	Q8NDX5	983 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	JARID2	Q92833	1246 aa	Predicted RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	LUC7L	Q9NQ29	371 aa	Known RBP	5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	TLR6	Q9Y2C9	796 aa		5.66	□□□□□ -1.5
TARDBP-220	ENST00000618606	RBM47	A0AV96	593 aa	Known RBP	5.65	□□□□□ -1.5
TARDBP-220	ENST00000618606	UPK3BL1	B0FP48	263 aa		5.65	□□□□□ -1.5
TARDBP-220	ENST00000618606	UPK3BL2	E5RIL1	263 aa		5.65	□□□□□ -1.5
TARDBP-220	ENST00000618606	IRS4	O14654	1257 aa	Predicted RBP	5.65	□□□□□ -1.5
TARDBP-220	ENST00000618606	EPHB3	P54753	998 aa		5.65	□□□□□ -1.5
TARDBP-220	ENST00000618606	DAB2	P98082	770 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms