RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ADCY5O95622 1261 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 PLCB2Q00722 1185 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 SLC35G1Q2M3R5 365 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 NOM1Q5C9Z4 860 aaKnown RBP19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 BRMS1Q9HCU9 246 aa19.94■□□□□ 0.78
PCDHGC3-205ENST00000617641 ESPNB1AK53 854 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 AP5Z1O43299 807 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 C21orf2O43822 256 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 RESP18Q5W5W9 173 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 KRI1Q8N9T8 703 aaKnown RBP19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 OSBPL5Q9H0X9 879 aaPredicted RBP19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 GNAQP50148 359 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 NFIAQ12857 509 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 TNFRSF25Q93038 417 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 ZDHHC15Q96MV8 337 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 HPSEQ9Y251 543 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
PCDHGC3-205ENST00000617641 GOLGA8HP0CJ92 632 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 SYKP43405 635 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 ZNF165P49910 485 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 NLRP5P59047 1200 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 KIAA2012Q0VF49 1180 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 STX1AQ16623 288 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 PALM3A6NDB9 673 aaPredicted RBP19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 ADAMTS3O15072 1205 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 CYTH3O43739 400 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 FKBP1AP62942 108 aaKnown RBP19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 GRIN1Q05586 938 aa19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 C11orf57Q6ZUT1 292 aaPredicted RBP19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 FBXO2Q9UK22 296 aaPredicted RBP19.92■□□□□ 0.78
PCDHGC3-205ENST00000617641 TOP1P11387 765 aaKnown RBP19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 AKR1B1P15121 316 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 RBM5P52756 815 aaKnown RBP eCLIP19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 CACNB3P54284 484 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 SPECC1Q5M775 1068 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 FAM237AA0A1B0GTK4 181 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 WNT7AO00755 349 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 ZFPM1Q8IX07 1006 aa19.91■□□□□ 0.78
PCDHGC3-205ENST00000617641 MYH8P13535 1937 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 TRIM75PA6NK02 468 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 PTPREP23469 700 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 NOVP48745 357 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 HS1BP3Q53T59 392 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 CPVLQ9H3G5 476 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 KIAA1468Q9P260 1216 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 KLRF2D3W0D1 207 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 USP17L2Q6R6M4 530 aa19.9■□□□□ 0.78
PCDHGC3-205ENST00000617641 SLURP2P0DP57 97 aa19.89■□□□□ 0.77
PCDHGC3-205ENST00000617641 CLEC10AQ8IUN9 316 aa19.89■□□□□ 0.77
PCDHGC3-205ENST00000617641 SUPT20HQ8NEM7 779 aa19.89■□□□□ 0.77
PCDHGC3-205ENST00000617641 MRIQ9BWK5 157 aa19.89■□□□□ 0.77
PCDHGC3-205ENST00000617641 MTMR4Q9NYA4 1195 aa19.89■□□□□ 0.77
PCDHGC3-205ENST00000617641 YDJCA8MPS7 323 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 PARP1P09874 1014 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 SHMT1P34896 483 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 TCP10Q12799 353 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 TYW1BQ6NUM6 668 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 TTLL6Q8N841 843 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 TIGD1Q96MW7 591 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 ANO10Q9NW15 660 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 SWAP70Q9UH65 585 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 KCNH3Q9ULD8 1083 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 NOL7Q9UMY1 257 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 CAVIN2O95810 425 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 HLA-DOAP06340 250 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 PTMAP06454 111 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 EIF6P56537 245 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 HDLBPQ00341 1268 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 WWC2Q6AWC2 1192 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 PIK3AP1Q6ZUJ8 805 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 LZTS2Q9BRK4 669 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 CCDC39Q9UFE4 941 aa19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 SRPRBQ9Y5M8 271 aaKnown RBP19.88■□□□□ 0.77
PCDHGC3-205ENST00000617641 IGKV6D-41A0A0C4DH26 115 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 HEATR3Q7Z4Q2 680 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 ZSCAN30Q86W11 494 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 SH3GLB2Q9NR46 395 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 USP17L5A8MUK1 530 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 CALML3P27482 149 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 IQCB1Q15051 598 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 ZNF174Q15697 407 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 LRRC47Q8N1G4 583 aaKnown RBP19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 SPZ1Q9BXG8 430 aa19.87■□□□□ 0.77
PCDHGC3-205ENST00000617641 DPEP1P16444 411 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 TTC38Q5R3I4 469 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 BLIDQ8IZY5 108 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 SERPINA10Q9UK55 444 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 LONRF3Q496Y0 759 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 CCDC93Q567U6 631 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 MYO3BQ8WXR4 1341 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 CSRNP2Q9H175 543 aa19.86■□□□□ 0.77
PCDHGC3-205ENST00000617641 PCDHA4Q9UN74 947 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms