RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TMX2Q9Y320 296 aa26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 TTC41PQ6P2S7 1318 aa26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 RANBP2P49792 3224 aaKnown RBP26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 M0R2C6 588 aa26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 AMOTL1Q8IY63 956 aa26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 DPF3Q92784 378 aa26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 TANGO6Q9C0B7 1094 aa26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 HMX1Q9NP08 348 aaPredicted RBP26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 ARPP21Q9UBL0 812 aaPredicted RBP26.68■■□□□ 1.86
NEDD4L-237ENST00000617539 SALL3Q9BXA9 1300 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 ZNF236Q9UL36 1845 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 PRKAR2AP13861 404 aaKnown RBP26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 RGS2P41220 211 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 CCNA1P78396 465 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 COG2Q14746 738 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 SBK1Q52WX2 424 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 SPICE1Q8N0Z3 855 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 DIS3LQ8TF46 1054 aaKnown RBP26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 APBA2Q99767 749 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 ARHGEF10LQ9HCE6 1279 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 EPB41L4AQ9HCS5 686 aaPredicted RBP26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 COL11A1P12107 1806 aaPredicted RBP26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 FRMPD3Q5JV73 1810 aa26.67■■□□□ 1.86
NEDD4L-237ENST00000617539 GPAA1O43292 621 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 ZKSCAN1P17029 563 aaPredicted RBP26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 CAPN2P17655 700 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 MNX1P50219 401 aaPredicted RBP26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 MAP2K5Q13163 448 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 LPAR1Q92633 364 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 HTATIP2Q9BUP3 242 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 VCPKMTQ9H867 229 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 COLQQ9Y215 455 aaPredicted RBP26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 ROBO3Q96MS0 1386 aa26.66■■□□□ 1.86
NEDD4L-237ENST00000617539 ZFYP08048 801 aaPredicted RBP26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 EEF2P13639 858 aaKnown RBP26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 PTPREP23469 700 aa26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 CACNB2Q08289 660 aaPredicted RBP26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 GIMAP6Q6P9H5 292 aa26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 PAWRQ96IZ0 340 aaKnown RBP26.65■■□□□ 1.86
NEDD4L-237ENST00000617539 GRB14Q14449 540 aa26.64■■□□□ 1.86
NEDD4L-237ENST00000617539 WDR78Q5VTH9 848 aa26.64■■□□□ 1.86
NEDD4L-237ENST00000617539 TRMT44Q8IYL2 757 aaKnown RBP26.64■■□□□ 1.86
NEDD4L-237ENST00000617539 MOV10L1Q9BXT6 1211 aaKnown RBP26.64■■□□□ 1.86
NEDD4L-237ENST00000617539 FLRT1Q9NZU1 646 aa26.64■■□□□ 1.86
NEDD4L-237ENST00000617539 SLC15A5A6NIM6 579 aa26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 RASA1P20936 1047 aa26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 SEC62Q99442 399 aaKnown RBP26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 SH2D4AQ9H788 454 aa26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 KANSL2Q9H9L4 492 aa26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 CWC22Q9HCG8 908 aaKnown RBP26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 HOXC10Q9NYD6 342 aa26.63■■□□□ 1.85
NEDD4L-237ENST00000617539 GLRX3O76003 335 aaKnown RBP26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 MX1P20591 662 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 CCND3P30281 292 aaPredicted RBP26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 DSG3P32926 999 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 STK11IPQ8N1F8 1099 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 ANKLE1Q8NAG6 615 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 ATG4CQ96DT6 458 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 YTHDC1Q96MU7 727 aaKnown RBP26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 OGDHLQ9ULD0 1010 aa26.62■■□□□ 1.85
NEDD4L-237ENST00000617539 DNAH12Q6ZR08 3092 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 MINDY4BA8MYZ0 360 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 ERC2O15083 957 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 WDR46O15213 610 aaKnown RBP26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 FLOT1O75955 427 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 HOXC6P09630 235 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 NPLOC4Q8TAT6 608 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 SPATC1LQ9H0A9 340 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 MYH4Q9Y623 1939 aa26.61■■□□□ 1.85
NEDD4L-237ENST00000617539 ATP2B2Q01814 1243 aa26.6■■□□□ 1.85
NEDD4L-237ENST00000617539 IGHA2P01877 340 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 GNAT2P19087 354 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 LHX8Q68G74 356 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 NECAB2Q7Z6G3 386 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 FSD1Q9BTV5 496 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 FBXO28Q9NVF7 368 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 IVNS1ABPQ9Y6Y0 642 aa26.59■■□□□ 1.85
NEDD4L-237ENST00000617539 TRIOBPQ9H2D6 2365 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 ERCC3P19447 782 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 TDO2P48775 406 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 HDAC1Q13547 482 aaPredicted RBP26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 ZMYM1Q5SVZ6 1142 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 CHRDL2Q6WN34 429 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 MB21D1Q8N884 522 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 SHCBP1Q8NEM2 672 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 ADAMTS5Q9UNA0 930 aa26.58■■□□□ 1.85
NEDD4L-237ENST00000617539 ZNFX1Q9P2E3 1918 aaKnown RBP26.57■■□□□ 1.84
NEDD4L-237ENST00000617539 PATL2C9JE40 543 aaKnown RBP26.57■■□□□ 1.84
NEDD4L-237ENST00000617539 ANKRD45Q5TZF3 282 aa26.57■■□□□ 1.84
NEDD4L-237ENST00000617539 IFNL3Q8IZI9 196 aa26.57■■□□□ 1.84
NEDD4L-237ENST00000617539 IGKV6D-41A0A0C4DH26 115 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 FOXP2O15409 715 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 ADORA2AP29274 412 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 FXR1P51114 621 aaKnown RBP eCLIP26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 TMEM132BQ14DG7 1078 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 LRRFIP1Q32MZ4 808 aaKnown RBP26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 NBPF3Q9H094 633 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 PRO3102Q9H379 93 aa26.56■■□□□ 1.84
NEDD4L-237ENST00000617539 MKNK2Q9HBH9 465 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms