RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 CLIP2Q9UDT6 1046 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 GREB1LQ9C091 1923 aaPredicted RBP22.37■■□□□ 1.17
SUSD3-205ENST00000617293 RAD50Q92878 1312 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 TSPY2A6NKD2 308 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 FMNL1O95466 1100 aaPredicted RBP22.36■■□□□ 1.17
SUSD3-205ENST00000617293 RRP12Q5JTH9 1297 aaKnown RBP22.36■■□□□ 1.17
SUSD3-205ENST00000617293 FBXO46Q6PJ61 603 aaPredicted RBP22.36■■□□□ 1.17
SUSD3-205ENST00000617293 LPAR1Q92633 364 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 CEP95Q96GE4 821 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 NYAP2Q9P242 653 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 ZSWIM8A7E2V4 1837 aa22.36■■□□□ 1.17
SUSD3-205ENST00000617293 IGKV6D-41A0A0C4DH26 115 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 CTGFP29279 349 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 FAM110CQ1W6H9 321 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 GOPCQ9HD26 462 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 MTMR4Q9NYA4 1195 aa22.35■■□□□ 1.17
SUSD3-205ENST00000617293 ORC4O43929 436 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 CAPN15O75808 1086 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 FGRP09769 529 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 FCGRTP55899 365 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 BMP2KLQ5H9B9 411 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 AKNAD1Q5T1N1 836 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 MFSD6Q6ZSS7 791 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 TRIM47Q96LD4 638 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 CTNNA3Q9UI47 895 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 PTPN22Q9Y2R2 807 aa22.34■■□□□ 1.17
SUSD3-205ENST00000617293 PEX10O60683 326 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 TTLL1O95922 423 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 GNRH1P01148 92 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 IMMTQ16891 758 aaKnown RBP22.33■■□□□ 1.17
SUSD3-205ENST00000617293 PAGR1Q9BTK6 254 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 NBPF3Q9H094 633 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 PLIN4Q96Q06 1357 aa22.33■■□□□ 1.17
SUSD3-205ENST00000617293 MYH4Q9Y623 1939 aa22.33■■□□□ 1.16
SUSD3-205ENST00000617293 WDR46O15213 610 aaKnown RBP22.32■■□□□ 1.16
SUSD3-205ENST00000617293 SGSM2O43147 1006 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 HOXD10P28358 340 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 COG2Q14746 738 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 TBC1D10CQ8IV04 446 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 GPRC5AQ8NFJ5 357 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 GTF3C2Q8WUA4 911 aaPredicted RBP22.32■■□□□ 1.16
SUSD3-205ENST00000617293 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 RNF41Q9H4P4 317 aaPredicted RBP22.32■■□□□ 1.16
SUSD3-205ENST00000617293 TXNRD2Q9NNW7 524 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 RBPJLQ9UBG7 517 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 HPS5Q9UPZ3 1129 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 MGAMO43451 1857 aa22.32■■□□□ 1.16
SUSD3-205ENST00000617293 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 F5H6K3 240 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 NMT2O60551 498 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 PCP11498 1178 aaKnown RBP22.31■■□□□ 1.16
SUSD3-205ENST00000617293 PTH1RQ03431 593 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 KLRC3Q07444 240 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 IFFO2Q5TF58 517 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 SAMD1Q6SPF0 538 aaPredicted RBP22.31■■□□□ 1.16
SUSD3-205ENST00000617293 MKL1Q969V6 931 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 IL17RBQ9NRM6 502 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 HOXC10Q9NYD6 342 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 MORF4L1Q9UBU8 362 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 STX8Q9UNK0 236 aa22.31■■□□□ 1.16
SUSD3-205ENST00000617293 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
SUSD3-205ENST00000617293 FLOT1O75955 427 aa22.3■■□□□ 1.16
SUSD3-205ENST00000617293 Q3C1V9 767 aa22.3■■□□□ 1.16
SUSD3-205ENST00000617293 POTEEQ6S8J3 1075 aa22.3■■□□□ 1.16
SUSD3-205ENST00000617293 LRRC47Q8N1G4 583 aaKnown RBP22.3■■□□□ 1.16
SUSD3-205ENST00000617293 SPDYE16A6NNV3 312 aaPredicted RBP22.29■■□□□ 1.16
SUSD3-205ENST00000617293 ERVK-9P63128 1117 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 ERVK-24P63145 666 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 FAM83BQ5T0W9 1011 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 SRRDQ9UH36 339 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 RABGAP1Q9Y3P9 1069 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 PTCH2Q9Y6C5 1203 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 LAMA4Q16363 1823 aa22.29■■□□□ 1.16
SUSD3-205ENST00000617293 NDUFB10O96000 172 aa22.28■■□□□ 1.16
SUSD3-205ENST00000617293 PRMT2P55345 433 aa22.28■■□□□ 1.16
SUSD3-205ENST00000617293 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
SUSD3-205ENST00000617293 CCAR1Q8IX12 1150 aaKnown RBP22.28■■□□□ 1.16
SUSD3-205ENST00000617293 NUP88Q99567 741 aaPredicted RBP22.28■■□□□ 1.16
SUSD3-205ENST00000617293 NEDD4P46934 1319 aa22.28■■□□□ 1.16
SUSD3-205ENST00000617293 MYPNQ86TC9 1320 aa22.28■■□□□ 1.16
SUSD3-205ENST00000617293 CNMDO75829 334 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 DSG3P32926 999 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 PRKCZQ05513 592 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 LBX2Q6XYB7 198 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 ESR2Q92731 530 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 COA7Q96BR5 231 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 ESYT1Q9BSJ8 1104 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 SYNPO2Q9UMS6 1093 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 GABRQQ9UN88 632 aa22.27■■□□□ 1.16
SUSD3-205ENST00000617293 U3KPZ7 1027 aaPredicted RBP22.27■■□□□ 1.16
SUSD3-205ENST00000617293 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 GMCL1P1Q8NEA9 526 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 NKX2-3Q8TAU0 364 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 RAET1EQ8TD07 263 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 CHMP4CQ96CF2 233 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 FBXO28Q9NVF7 368 aa22.26■■□□□ 1.15
SUSD3-205ENST00000617293 BTBD7Q9P203 1132 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms