RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 DDX20Q9UHI6 824 aaKnown RBP17.34■□□□□ 0.37
NOP56-220ENST00000616692 NUP98P52948 1817 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
NOP56-220ENST00000616692 CA8P35219 290 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 FNTAP49354 379 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 DEFB115Q30KQ5 88 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 LONRF3Q496Y0 759 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 GBP2P32456 591 aaPredicted RBP17.34■□□□□ 0.37
NOP56-220ENST00000616692 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
NOP56-220ENST00000616692 HLFQ16534 295 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
NOP56-220ENST00000616692 TRIM11Q96F44 468 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 HDAC6Q9UBN7 1215 aa17.34■□□□□ 0.37
NOP56-220ENST00000616692 RNF8O76064 485 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.36
NOP56-220ENST00000616692 CEP85LQ5SZL2 805 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 PCDHB15Q9Y5E8 787 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 PDLIM1O00151 329 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 ERLIN1O75477 346 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 ECE1P42892 770 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 PAPOLAP51003 745 aaKnown RBP17.33■□□□□ 0.36
NOP56-220ENST00000616692 BARX2Q9UMQ3 279 aaPredicted RBP17.33■□□□□ 0.36
NOP56-220ENST00000616692 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.36
NOP56-220ENST00000616692 M0R2C6 588 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 MYO1FO00160 1098 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 BCAR3O75815 825 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 RPL13P26373 211 aaKnown RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 MCM2P49736 904 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 MAMSTRQ6ZN01 415 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 DRC7Q8IY82 874 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 PUF60Q9UHX1 559 aaKnown RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 ABCC12Q96J65 1359 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 IBSPP21815 317 aaPredicted RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 ABL2P42684 1182 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
NOP56-220ENST00000616692 PIAS4Q8N2W9 510 aaPredicted RBP17.32■□□□□ 0.36
NOP56-220ENST00000616692 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 MAP2K7O14733 419 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 HDAC7Q8WUI4 952 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
NOP56-220ENST00000616692 RABL2AQ9UBK7 228 aaPredicted RBP17.31■□□□□ 0.36
NOP56-220ENST00000616692 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 EBAG9O00559 213 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 FSBPO95073 299 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
NOP56-220ENST00000616692 TRIML1Q8N9V2 468 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 RSRC1Q96IZ7 334 aaKnown RBP17.31■□□□□ 0.36
NOP56-220ENST00000616692 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 DUSP9Q99956 384 aaKnown RBP17.31■□□□□ 0.36
NOP56-220ENST00000616692 FUCA2Q9BTY2 467 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 PNMA2Q9UL42 364 aa17.31■□□□□ 0.36
NOP56-220ENST00000616692 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
NOP56-220ENST00000616692 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 Q4G0T1 1027 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 GORASP1Q9BQQ3 440 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
NOP56-220ENST00000616692 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 N6AMT1Q9Y5N5 214 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 NEMFO60524 1076 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 TADA3O75528 432 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 VDRP11473 427 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
NOP56-220ENST00000616692 MIS18BP1Q6P0N0 1132 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 CLIC6Q96NY7 704 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 KCND1Q9NSA2 647 aa17.3■□□□□ 0.36
NOP56-220ENST00000616692 CTDP1Q9Y5B0 961 aaPredicted RBP17.3■□□□□ 0.36
NOP56-220ENST00000616692 NTSR2O95665 410 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
NOP56-220ENST00000616692 MX1P20591 662 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 ACTN3Q08043 901 aaPredicted RBP17.29■□□□□ 0.36
NOP56-220ENST00000616692 MTHFD1LQ6UB35 978 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 MAGEC3Q8TD91 643 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 CUL5Q93034 780 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 SLC35B4Q969S0 331 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 KLC4Q9NSK0 619 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 DLG5Q8TDM6 1919 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 ERICH2A1L162 156 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms