RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
LHX1-202ENST00000616237 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.84
LHX1-202ENST00000616237 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
LHX1-202ENST00000616237 IL25Q9H293 177 aa20.27■□□□□ 0.84
LHX1-202ENST00000616237 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
LHX1-202ENST00000616237 BRCA2P51587 3418 aa20.26■□□□□ 0.83
LHX1-202ENST00000616237 TNPO2O14787 897 aaKnown RBP20.26■□□□□ 0.83
LHX1-202ENST00000616237 RGS19P49795 217 aa20.26■□□□□ 0.83
LHX1-202ENST00000616237 FAM47AQ5JRC9 791 aa20.26■□□□□ 0.83
LHX1-202ENST00000616237 SH3TC2Q8TF17 1288 aa20.26■□□□□ 0.83
LHX1-202ENST00000616237 ZNF333Q96JL9 665 aa20.26■□□□□ 0.83
LHX1-202ENST00000616237 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
LHX1-202ENST00000616237 FLT3LGP49771 235 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 ERVK-24P63145 666 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 PDE4BQ07343 736 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 SLC9C1Q4G0N8 1177 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 LBX2Q6XYB7 198 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 GPRC5AQ8NFJ5 357 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 LPAR1Q92633 364 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 PAGR1Q9BTK6 254 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 NYAP2Q9P242 653 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 RLFQ13129 1914 aa20.25■□□□□ 0.83
LHX1-202ENST00000616237 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
LHX1-202ENST00000616237 FGRP09769 529 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 NEDD1Q8NHV4 660 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 PORCNQ9H237 461 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 SH2D4AQ9H788 454 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 BTBD7Q9P203 1132 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 GJD2Q9UKL4 321 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 PLIN4Q96Q06 1357 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 ZMYM6O95789 1325 aa20.24■□□□□ 0.83
LHX1-202ENST00000616237 HIP1O00291 1037 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 TFAP4Q01664 338 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 RAET1EQ8TD07 263 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 GTF3C2Q8WUA4 911 aaPredicted RBP20.23■□□□□ 0.83
LHX1-202ENST00000616237 TANGO6Q9C0B7 1094 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
LHX1-202ENST00000616237 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
LHX1-202ENST00000616237 COG2Q14746 738 aa20.22■□□□□ 0.83
LHX1-202ENST00000616237 NKX2-3Q8TAU0 364 aa20.22■□□□□ 0.83
LHX1-202ENST00000616237 COA7Q96BR5 231 aa20.22■□□□□ 0.83
LHX1-202ENST00000616237 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
LHX1-202ENST00000616237 KIAA0100Q14667 2235 aaKnown RBP20.22■□□□□ 0.83
LHX1-202ENST00000616237 POTEFA5A3E0 1075 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 GRK4P32298 578 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 HAND2P61296 217 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 MKL1Q969V6 931 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 IL17RBQ9NRM6 502 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 PLXNB2O15031 1838 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 F5H6K3 240 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 ORC4O43929 436 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 MYCP01106 439 aaPredicted RBP20.21■□□□□ 0.83
LHX1-202ENST00000616237 DSG3P32926 999 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
LHX1-202ENST00000616237 KLRC3Q07444 240 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 IRF5Q13568 498 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 CENPQQ7L2Z9 268 aaPredicted RBP20.21■□□□□ 0.83
LHX1-202ENST00000616237 NBPF11Q86T75 865 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
LHX1-202ENST00000616237 GOPCQ9HD26 462 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 FBXO28Q9NVF7 368 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
LHX1-202ENST00000616237 PARP14Q460N5 1801 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 NMT2O60551 498 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 FLOT1O75955 427 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 TTLL1O95922 423 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 NDUFB10O96000 172 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 ELNP15502 786 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 MTFR1Q15390 333 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 FAM83BQ5T0W9 1011 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
LHX1-202ENST00000616237 ATG4CQ96DT6 458 aa20.2■□□□□ 0.82
LHX1-202ENST00000616237 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 MYH4Q9Y623 1939 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 RAD21O60216 631 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 ADCY3O60266 1144 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 CHMLP26374 656 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
LHX1-202ENST00000616237 TSPY2A6NKD2 308 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
LHX1-202ENST00000616237 MAPK4P31152 587 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 GPR142Q7Z601 462 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 SLAIN1Q8ND83 568 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 PXYLP1Q8TE99 480 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 DSCC1Q9BVC3 393 aa20.18■□□□□ 0.82
LHX1-202ENST00000616237 NOVP48745 357 aa20.17■□□□□ 0.82
LHX1-202ENST00000616237 AKNAD1Q5T1N1 836 aa20.17■□□□□ 0.82
LHX1-202ENST00000616237 STAG1Q8WVM7 1258 aa20.17■□□□□ 0.82
LHX1-202ENST00000616237 USP6NLQ92738 828 aa20.17■□□□□ 0.82
LHX1-202ENST00000616237 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms