RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CCDC197Q8NCU1 140 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 DTNBO60941 627 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 ISM2Q6H9L7 571 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 C6orf203Q9P0P8 240 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-211ENST00000615798 EXOC5O00471 708 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 MAP3K12Q12852 859 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 C8orf74Q6P047 294 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 ANKRD35Q8N283 1001 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 CNNM2Q9H8M5 875 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 PSMA4P25789 261 aaKnown RBP10.22□□□□□ -0.77
COL12A1-211ENST00000615798 MPHOSPH8Q99549 860 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 CAPS2Q9BXY5 557 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 PARVBQ9HBI1 364 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 IL1RAPL2Q9NP60 686 aa10.22□□□□□ -0.77
COL12A1-211ENST00000615798 TPD52L2O43399 206 aaKnown RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 GJB2P29033 226 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 SYT10Q6XYQ8 523 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 LLPHQ9BRT6 129 aaKnown RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 RAD21L1Q9H4I0 556 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 ATP6V0A4Q9HBG4 840 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 SEC63Q9UGP8 760 aaKnown RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 PACSIN2Q9UNF0 486 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 TNNC2P02585 160 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 RFWD2Q8NHY2 731 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 TSC1Q92574 1164 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 TBCAO75347 108 aaKnown RBP10.21□□□□□ -0.77
COL12A1-211ENST00000615798 TRPA1O75762 1119 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 F13A1P00488 732 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 LMNB1P20700 586 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 CEP85Q6P2H3 762 aa10.21□□□□□ -0.77
COL12A1-211ENST00000615798 ZBTB7BO15156 539 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-211ENST00000615798 P3H4Q92791 437 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 ACEP12821 1306 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 SART1O43290 800 aaKnown RBP10.21□□□□□ -0.78
COL12A1-211ENST00000615798 AKAP4Q5JQC9 854 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 BRAPQ7Z569 592 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 LINS1Q8NG48 757 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 ADCK1Q86TW2 530 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 GUCY2CP25092 1073 aa10.21□□□□□ -0.78
COL12A1-211ENST00000615798 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 KRT14P02533 472 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CHGBP05060 677 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 SLC30A9Q6PML9 568 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 ZC3H18Q86VM9 953 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 SPATA17Q96L03 361 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 HCLS1P14317 486 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 ANO6Q4KMQ2 910 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 LZICQ8WZA0 190 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 MED14O60244 1454 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 RGS16O15492 202 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 RASGRF2O14827 1237 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 DKC1O60832 514 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CALML4Q96GE6 196 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 PPANQ9NQ55 473 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 SPHKAPQ2M3C7 1700 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 KIAA1210Q9ULL0 1709 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 TRAF5O00463 557 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 UQCRFS1P1P0C7P4 283 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 TEKT1Q969V4 418 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CARD14Q9BXL6 1004 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 CEP55Q53EZ4 464 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 YIPF3Q9GZM5 350 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 SMARCAD1Q9H4L7 1026 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 RMI1Q9H9A7 625 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 ABCC4O15439 1325 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 PRR23D1E9PI22 279 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 PRR23D2P0DMB1 279 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-211ENST00000615798 DAB2P98082 770 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 KSR2Q6VAB6 950 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 UBE2Q1Q7Z7E8 422 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 TM6SF1Q9BZW5 370 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 MAD1L1Q9Y6D9 718 aa10.2□□□□□ -0.78
COL12A1-211ENST00000615798 IFNL2Q8IZJ0 200 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 ATP11BQ9Y2G3 1177 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 DEAF1O75398 565 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-211ENST00000615798 NBPF9Q3BBW0 867 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 USP26Q9BXU7 913 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 ZNF213O14771 459 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 HGSO14964 777 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-211ENST00000615798 SNX29Q8TEQ0 813 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 SIL1Q9H173 461 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms